Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Buceros_20rhinoceros_20silvestris_20[refseq_20GCF_5F000710305.1_2020
14-06-25] 62,257 sequences; 1,065,782,791 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq40441 140 2e-28
seq27582 131 1e-25
>seq40441
Length=3214
Score = 140 bits (154), Expect = 2e-28
Identities = 170/230 (74%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| ||||||| | ||| || ||||||| |||| ||||||||| ||||| ||||| ||
Sbjct 608 CCACCCCTCAGGCGCAGCACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 549
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
||| | || |||| ||||| ||||| || ||||||||||| | ||||| || | ||
Sbjct 548 AGGGTACGACCATCTTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGGGGA 489
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928
| || |||||||| | || || || || || || || | ||| ||| ||| |
Sbjct 488 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCAC--ATTCTCAATGGTGTCACTGGGCTCAA 431
Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
| |||| || |||||||| || || |||||||| |||||||||||||||
Sbjct 430 CCTCAAGCGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 381
Score = 132 bits (146), Expect = 3e-26
Identities = 168/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 34748 TTTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCC 34807
|| || ||||||| | ||| || ||||| | |||| ||||||||| ||||| |||||
Sbjct 839 TTACCACCCCTCAGGCGCAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCA 780
Query 34808 GATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGC 34867
|| ||| | || |||| ||||| ||||| || ||||||||||| | ||||| || |
Sbjct 779 GACAGGGTACGACCATCTTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGG 720
Query 34868 GGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCG 34927
|| | || |||||||| | || || || ||| | || | ||| | | |||
Sbjct 719 GGGATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCACTAGGCTCA 660
Query 34928 ACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| || | ||| |||||||| || || |||||||| |||||||||||||||
Sbjct 659 ACTTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 609
Score = 129 bits (142), Expect = 4e-25
Identities = 167/229 (73%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| ||||||| | ||| || || || | |||| ||||||||| ||||| ||||| ||
Sbjct 380 CCACCCCTCAGGCGCAGCACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 321
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
||| | || |||| ||||| ||||| || ||||||||||| | ||||| || | ||
Sbjct 320 AGGGTACGACCATCTTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGGGGA 261
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928
| || |||||||| | || || || || || || || | ||| ||| ||| |
Sbjct 260 ATGCCTTCCTTGTCCTGGATCTTAGCCTTCAC--ATTCTCAATGGTGTCACTGGGCTCAA 203
Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
| |||| || |||||||| || || |||||||| ||||||||||||||
Sbjct 202 CCTCAAGCGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 154
>seq27582
Length=3938
Score = 131 bits (144), Expect = 1e-25
Identities = 168/230 (73%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| ||||||| | ||| || ||||| | |||| ||||||||| ||||| ||||| ||
Sbjct 2338 CCACCCCTCAGGCGCAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 2397
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
|| |||| |||| ||||| ||||| || || |||||||| | ||||| || | ||
Sbjct 2398 AGAGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGA 2457
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928
| || |||||||| | || || || || || || || | ||| ||| ||| |
Sbjct 2458 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCAC--ATTCTCGATGGTGTCACTGGGCTCAA 2515
Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
| || | ||| |||||||| || || |||||||| |||||||||||||||
Sbjct 2516 CCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 2565
Score = 125 bits (138), Expect = 5e-24
Identities = 167/230 (73%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| |||||||| | ||| || || || | |||| ||||||||| ||||| ||||| ||
Sbjct 2794 CCACCCCTCAAGCGCAGCACAAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 2853
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
|| |||| | || ||||| ||||| || || |||||||| | ||||| || | ||
Sbjct 2854 AGAGTGCGTCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGA 2913
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928
| || |||||||| | || || || || || || || | ||| ||| ||| |
Sbjct 2914 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCAC--ATTCTCAATGGTGTCACTGGGCTCAA 2971
Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
| || | ||| |||||||| || || |||||||| |||||||||||||||
Sbjct 2972 CCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 3021
Score = 114 bits (126), Expect = 8e-21
Identities = 156/216 (72%), Gaps = 4/216 (2%)
Strand=Plus/Plus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| || ||||| | |||| ||||||||| ||||| ||||| || ||| | || ||||
Sbjct 2580 CAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGACCATC 2639
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
||||| ||||| || || |||||||| | ||||| || | || | || ||||||||
Sbjct 2640 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGAGGAATGCCTTCCTTGTC 2699
Query 34885 GTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATG 34942
| || || || || || || || | ||| ||| ||| || || | || ||
Sbjct 2700 CTGGATCTTGGCCTTCAC--ATTCTCGATGGTGTCACTGGGCTCAACTTCCAGAGTGATA 2757
Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
||||| || || |||||||| |||||||||||||||
Sbjct 2758 GTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 2793
Score = 114 bits (126), Expect = 8e-21
Identities = 156/216 (72%), Gaps = 4/216 (2%)
Strand=Plus/Plus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| |||| ||| | |||| ||||||||| ||||| || || || | | |||| | ||
Sbjct 3492 CAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAATCGGACAAGGTGCGTCCGTC 3551
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
||||| ||||| || || |||||||| | ||||| || | || | || ||||||||
Sbjct 3552 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCCTTGTC 3611
Query 34885 GTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATG 34942
| || || || || || || || | ||| ||| ||| || || | ||| |||
Sbjct 3612 CTGGATCTTGGCCTTCAC--ATTCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATG 3669
Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
||||| || || |||||||| |||||||||||||||
Sbjct 3670 GTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 3705
Score = 109 bits (120), Expect = 4e-19
Identities = 155/216 (72%), Gaps = 4/216 (2%)
Strand=Plus/Plus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| |||| ||| | ||| ||||||||||||||| ||||| || || |||| | ||
Sbjct 3036 CAGCACCAAGTGCAGCGTGGACTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGTCCGTC 3095
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
||||| ||||| || || |||||||| | ||||| || | || | || ||||||||
Sbjct 3096 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGAGGAATGCCTTCCTTGTC 3155
Query 34885 GTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATG 34942
| || || || || || || || | ||| ||| ||| || || | || ||
Sbjct 3156 CTGGATCTTGGCCTTCAC--ATTCTCGATGGTGTCACTGGGCTCAACTTCCAGAGTGATA 3213
Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
||||| || || |||||||| |||||||||||||||
Sbjct 3214 GTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 3249
Score = 105 bits (116), Expect = 4e-18
Identities = 154/216 (71%), Gaps = 4/216 (2%)
Strand=Plus/Plus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| |||| ||| | |||| ||||||||| ||||| || || || | | |||| | ||
Sbjct 3264 CAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAATCGGACAAGGTGCGTCCGTC 3323
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
||||| ||||| || || |||||||| | ||||| || | || | || ||||||||
Sbjct 3324 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCCTTGTC 3383
Query 34885 GTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATG 34942
| || || || || || || || | ||| ||| ||| || || | || ||
Sbjct 3384 CTGGATCTTGGCCTTCAC--ATTCTCGATGGTGTCACTGGGCTCAACTTCCAGAGTGATA 3441
Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
||||| || || |||||||| |||||||||||||||
Sbjct 3442 GTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 3477
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325445678247083
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