Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Buceros_20rhinoceros_20silvestris_20[refseq_20GCF_5F000710305.1_2020 14-06-25] 62,257 sequences; 1,065,782,791 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq27582 82.4 6e-11 >seq27582 Length=3938 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || ||||| || || | || ||||| || || || | ||| ||| | | Sbjct 3248 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACTATCACTCTGGAAGTTGAGCCCAGT 3189 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | || || ||||| || || |||||| | || |||||| Sbjct 3188 GACACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCTGATCAG 3129 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| || || | ||| || || |||||||| |||| || || | ||||||||| Sbjct 3128 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGACGGACGCACTCTGTCCGACTACAAC 3069 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTG 107768 ||||| |||||||| ||| ||||| ||||| || Sbjct 3068 ATTCAGAAGGAGTCCACGCTGCACTTGGTGCTG 3036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398574149361073