Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Buceros_20rhinoceros_20silvestris_20[refseq_20GCF_5F000710305.1_2020 14-06-25] 62,257 sequences; 1,065,782,791 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq43 105 5e-17 >seq43 Length=48180 Score = 105 bits (116), Expect = 5e-17 Identities = 273/410 (67%), Gaps = 6/410 (1%) Strand=Plus/Minus Query 281432 ACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTC 281491 || || || |||||||||||||| | ||||| ||||| || || || ||||| || | Sbjct 1436 ACGTTCAGGATACCATTGGCATCGATGTCAAAAGTGACCTCGATCTGGGGGACTCCACGG 1377 Query 281492 TGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAAT 281551 | || || ||||| || | | ||| | ||||| || || || || || | Sbjct 1376 GGTGCCGGGGGGATGCCCGTTAGGTCGAATTTGCCCAGCAAGTTGTTGTCCTTCGTCATG 1317 Query 281552 TTTCGTTCACCCTCGAAAATTTGGAT-AGTA-ACTACAGTTTGATTATCTGAATAAGTTG 281609 | ||||||||| | | |||| || | ||| | | || || || || || || | Sbjct 1316 GCCCTCTCACCCTCGTACACCTGGACCAGGACACTGC--TCTGGTTGTCCGAGTAGGTGG 1259 Query 281610 TAAATACTCTGGATTT-TTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATA 281668 | || |||| ||| ||| ||||| || ||||| | | || | | |||||| Sbjct 1258 TGAAGG-TCTGAGTTTGTTTGGTGGGAATGGTGGTGTTGCGCTTGATGAGAGCGGTCATC 1200 Query 281669 ATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTT 281728 | ||||||||||| || | || || || |||||||||||||| | || | | || Sbjct 1199 ACTCCACCAGCTGTCTCGATGCCCAGGGACAGAGGAGTGACATCCAGCAGCAGGAGATCC 1140 Query 281729 TGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCA 281788 || | || ||| | | || | || ||||||||||| | ||||||||||| ||| Sbjct 1139 TGCACATTCTCAGACTTGTCTCCCATGAGGATAGCTGCTTGCACGGCAGCACCATAAGCA 1080 Query 281789 ACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAA 281838 ||||| |||||||| || | ||| || || | ||| |||||||| || Sbjct 1079 ACAGCCTCATCAGGGTTGATGCTTTTGTTGAGCTCTTTGCCATTGAAGAA 1030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3737573844398082