Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Buceros_20rhinoceros_20silvestris_20[refseq_20GCF_5F000710305.1_2020 14-06-25] 62,257 sequences; 1,065,782,791 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq12919 120 5e-22 >seq12919 Length=70795 Score = 120 bits (132), Expect = 5e-22 Identities = 123/161 (76%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 58379 GCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCATA 58438 || ||||||||||| ||| | || ||||| || ||||| || |||||||| || ||||| Sbjct 43043 GCTTTATGGTGGTATTATGTCTCCAAAGGAATTGAATATTTGGATACAGTATTCTTCATC 42984 Query 58439 CTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGTTT 58498 || ||||| || ||||| || | || || || || || ||||| ||||| || ||||| Sbjct 42983 CTGAGGAAGAAATTTAACCAAATCAGTTTCCTTCATGTCTATCACCATTTCACCATGTTC 42924 Query 58499 ACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCA 58539 || || | ||| | |||||||| ||| ||||||| || || Sbjct 42923 ACCTTGTGGTGGATTGGTATTAAGTGGGTTGCAGGTGGACA 42883 Score = 98.7 bits (108), Expect = 2e-15 Identities = 101/132 (77%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 58541 GCATTTTTCGGCGCTCAGTTGAATTCTTTTATCCATGTTATTATGTATAGTTATTATGGT 58600 || ||||| || || ||| ||||| | ||||| ||||| || ||||||| |||||||| Sbjct 40836 GCTTTTTTTGGAGCCCAGATGAATGCATTTATTCATGTCATAATGTATATGTATTATGGA 40777 Query 58601 ATGGCGGCGTGTGGACATATGTTTAAAAAGTATTTATGGTGGAAGCGTTACCTTACTATA 58660 | || || ||||| | || ||| | ||||| | ||||||||||| ||| | || ||| Sbjct 40776 TTAGCTGCCTGTGGCCCTAAATTTCAGAAGTACCTGTGGTGGAAGCGATACTTGACCATA 40717 Query 58661 ATGCAATTGGTA 58672 ||||||||||| Sbjct 40716 TTGCAATTGGTA 40705 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 902708154111520