Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Buceros_20rhinoceros_20silvestris_20[refseq_20GCF_5F000710305.1_2020
14-06-25] 62,257 sequences; 1,065,782,791 total letters
Query= NC_024447.1
Length=282356
Score E
Sequences producing significant alignments: (Bits) Value
seq12919 120 5e-22
>seq12919
Length=70795
Score = 120 bits (132), Expect = 5e-22
Identities = 123/161 (76%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 58379 GCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCATA 58438
|| ||||||||||| ||| | || ||||| || ||||| || |||||||| || |||||
Sbjct 43043 GCTTTATGGTGGTATTATGTCTCCAAAGGAATTGAATATTTGGATACAGTATTCTTCATC 42984
Query 58439 CTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGTTT 58498
|| ||||| || ||||| || | || || || || || ||||| ||||| || |||||
Sbjct 42983 CTGAGGAAGAAATTTAACCAAATCAGTTTCCTTCATGTCTATCACCATTTCACCATGTTC 42924
Query 58499 ACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCA 58539
|| || | ||| | |||||||| ||| ||||||| || ||
Sbjct 42923 ACCTTGTGGTGGATTGGTATTAAGTGGGTTGCAGGTGGACA 42883
Score = 98.7 bits (108), Expect = 2e-15
Identities = 101/132 (77%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 58541 GCATTTTTCGGCGCTCAGTTGAATTCTTTTATCCATGTTATTATGTATAGTTATTATGGT 58600
|| ||||| || || ||| ||||| | ||||| ||||| || ||||||| ||||||||
Sbjct 40836 GCTTTTTTTGGAGCCCAGATGAATGCATTTATTCATGTCATAATGTATATGTATTATGGA 40777
Query 58601 ATGGCGGCGTGTGGACATATGTTTAAAAAGTATTTATGGTGGAAGCGTTACCTTACTATA 58660
| || || ||||| | || ||| | ||||| | ||||||||||| ||| | || |||
Sbjct 40776 TTAGCTGCCTGTGGCCCTAAATTTCAGAAGTACCTGTGGTGGAAGCGATACTTGACCATA 40717
Query 58661 ATGCAATTGGTA 58672
|||||||||||
Sbjct 40716 TTGCAATTGGTA 40705
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 902708154111520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |