Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Buceros_20rhinoceros_20silvestris_20[refseq_20GCF_5F000710305.1_2020
14-06-25] 62,257 sequences; 1,065,782,791 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq27582 149 6e-31
seq40441 132 5e-26
seq1566 102 8e-17
>seq27582
Length=3938
Score = 149 bits (164), Expect = 6e-31
Identities = 157/207 (76%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514
|| || | ||||||||| ||||| || ||||||||| || ||| ||| || |||
Sbjct 3499 AAGTGCAGGGTGGACTCCTTCTGGATGTTGTAATCGGACAAGGTGCGTCCGTCTTCCAGC 3558
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
|||||||| || | || |||| |||||| |||||||| |||||||||||||| ||||
Sbjct 3559 TGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCCTTGTCCTGGATC 3618
Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634
|| ||| | | ||||| ||||| ||||||| || |||| ||||| ||| |||||
Sbjct 3619 TTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTCTTGCCA 3678
Query 133635 GTCAGAGTTTTTACGAAAATCTGCATG 133661
||||| || || || || |||||||||
Sbjct 3679 GTCAGGGTCTTCACAAAGATCTGCATG 3705
Score = 145 bits (160), Expect = 7e-30
Identities = 155/205 (76%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516
||| | ||||||||| ||||| || ||||| ||| || ||| ||| || |||||
Sbjct 2817 ATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCGTCTTCCAGCTG 2876
Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576
|||||| || | || |||| |||||| |||||||| |||||||||||||| ||||||
Sbjct 2877 CTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCCTTGTCCTGGATCTT 2936
Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636
||| | | ||||| ||||| ||||||| || |||| ||||| ||| ||||| ||
Sbjct 2937 GGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGT 2996
Query 133637 CAGAGTTTTTACGAAAATCTGCATG 133661
||| || || || || |||||||||
Sbjct 2997 CAGGGTCTTCACAAAGATCTGCATG 3021
Score = 138 bits (152), Expect = 1e-27
Identities = 152/200 (76%), Gaps = 2/200 (1%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||||||||| ||||| || ||||| ||| || ||| | | | || || ||||||||||
Sbjct 2367 GGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCA-TCTTCCAGCTGCTTGC 2425
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || | || |||| |||||| |||||||| |||||||||||||| |||||| ||
Sbjct 2426 CAGCAAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCT 2485
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | ||| | ||||| ||||||| || |||| ||||| ||| ||||| ||||| |
Sbjct 2486 TCACATTCTCGATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGGG 2545
Query 133642 TTTTTACGAAAATCTGCATG 133661
| || || || |||||||||
Sbjct 2546 TCTTCACAAAGATCTGCATG 2565
Score = 131 bits (144), Expect = 2e-25
Identities = 153/207 (74%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514
|| || | ||||||||| ||||| || ||||||||| || ||| ||| || |||
Sbjct 3271 AAGTGCAGGGTGGACTCCTTCTGGATGTTGTAATCGGACAAGGTGCGTCCGTCTTCCAGC 3330
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
|||||||| || | || |||| |||||| |||||||| |||||||||||||| ||||
Sbjct 3331 TGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCCTTGTCCTGGATC 3390
Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634
|| ||| | | ||| | ||||| ||||||| || || | |||| || |||||
Sbjct 3391 TTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCAACTTCCAGAGTGATAGTCTTGCCA 3450
Query 133635 GTCAGAGTTTTTACGAAAATCTGCATG 133661
||||| || || || || |||||||||
Sbjct 3451 GTCAGGGTCTTCACAAAGATCTGCATG 3477
Score = 120 bits (132), Expect = 3e-22
Identities = 148/200 (74%), Gaps = 2/200 (1%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||||||||| ||||| || ||||| ||| || || ||| | || || ||||||||||
Sbjct 2595 GGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGACCA-TCTTCCAGCTGCTTGC 2653
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || | || |||| |||||| || ||||| |||||||||||||| |||||| ||
Sbjct 2654 CAGCAAAGATCAGCCTCTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCT 2713
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | ||| | ||||| ||||||| || || | |||| || ||||| ||||| |
Sbjct 2714 TCACATTCTCGATGGTGTCACTGGGCTCAACTTCCAGAGTGATAGTCTTGCCAGTCAGGG 2773
Query 133642 TTTTTACGAAAATCTGCATG 133661
| || || || |||||||||
Sbjct 2774 TCTTCACAAAGATCTGCATG 2793
Score = 118 bits (130), Expect = 1e-21
Identities = 145/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523
|||||||| ||||| || ||||| ||| || ||| ||| || |||||||||||
Sbjct 3052 GTGGACTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGTCCGTCTTCCAGCTGCTTGCCA 3111
Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583
|| | || |||| |||||| || ||||| |||||||||||||| |||||| |||
Sbjct 3112 GCAAAGATCAGCCTCTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC 3171
Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643
| | ||| | ||||| ||||||| || || | |||| || ||||| ||||| ||
Sbjct 3172 ACATTCTCGATGGTGTCACTGGGCTCAACTTCCAGAGTGATAGTCTTGCCAGTCAGGGTC 3231
Query 133644 TTTACGAAAATCTGCATG 133661
|| || || |||||||||
Sbjct 3232 TTCACAAAGATCTGCATG 3249
>seq40441
Length=3214
Score = 132 bits (146), Expect = 5e-26
Identities = 151/200 (76%), Gaps = 2/200 (1%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||||||||| ||||| || ||||| || || || ||| | || || ||||||||||
Sbjct 807 GGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGACCA-TCTTCCAGCTGCTTGC 749
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| ||| | || |||| |||||| ||||| ||||||||||||||||| |||||| ||
Sbjct 748 CAGCGAAGATCAGCCTCTGCTGATCGGGGGGGATGCCTTCCTTGTCCTGGATCTTGGCCT 689
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | ||||| ||||| | ||||| || || | ||||| ||| ||||| ||||| |
Sbjct 688 TCACGTTCTCAATGGTGTCACTAGGCTCAACTTCCAGGGTGATGGTCTTGCCAGTCAGGG 629
Query 133642 TTTTTACGAAAATCTGCATG 133661
| || || || |||||||||
Sbjct 628 TCTTCACAAAGATCTGCATG 609
Score = 129 bits (142), Expect = 6e-25
Identities = 153/205 (75%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | ||||||||| ||||| || ||||| || || || ||| | || || ||||
Sbjct 357 ATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGACCA-TCTTCCAGCT 299
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
||||||| ||| | || |||| |||||| ||||| || |||||||||||||| |||||
Sbjct 298 GCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGGATCT 239
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
| ||| | | ||||| ||||| ||||||| || || | |||| ||| ||||| |
Sbjct 238 TAGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGCGTGATGGTCTTGCCAG 179
Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660
|||| || || || || ||||||||
Sbjct 178 TCAGGGTCTTCACAAAGATCTGCAT 154
Score = 129 bits (142), Expect = 6e-25
Identities = 150/200 (75%), Gaps = 2/200 (1%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||||||||| ||||| || ||||| || || || ||| | || || ||||||||||
Sbjct 579 GGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGACCA-TCTTCCAGCTGCTTGC 521
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| ||| | || |||| |||||| ||||| || |||||||||||||| |||||| ||
Sbjct 520 CAGCGAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCT 461
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | ||||| ||||| ||||||| || || | |||| ||| ||||| ||||| |
Sbjct 460 TCACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGCGTGATGGTCTTGCCAGTCAGGG 401
Query 133642 TTTTTACGAAAATCTGCATG 133661
| || || || |||||||||
Sbjct 400 TCTTCACAAAGATCTGCATG 381
>seq1566
Length=12574
Score = 102 bits (112), Expect = 8e-17
Identities = 103/134 (77%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 148850 CTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCC 148909
||||||| | | ||||||| ||||| || | ||| |||||||||||||| || ||
Sbjct 2892 CTCATCCTTGCTGGTGTACTCCACGATTTCAGTGCATAGATTGCTGCATTTAATGGTCCC 2951
Query 148910 CACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCC 148969
|| ||||| || |||||||||| |||||| | ||||||||| | |||||| ||| |||
Sbjct 2952 CAGGTTCTGCTGGTTGCTCTTGCGGTTGCAGGAGTCCTTGTAGACCATGTAGGGTGTGCC 3011
Query 148970 AGTTTCCACCTGCG 148983
|| ||| |||||
Sbjct 3012 GGTCTCCGTCTGCG 3025
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483044595890680
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