Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Buceros_20rhinoceros_20silvestris_20[refseq_20GCF_5F000710305.1_2020 14-06-25] 62,257 sequences; 1,065,782,791 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq58628 91.5 2e-13 seq10813 91.5 2e-13 >seq58628 Length=483 Score = 91.5 bits (100), Expect = 2e-13 Identities = 110/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 8611 TACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCATA 8670 |||||| ||||| | | ||||| || | ||||| || || |||| |||| | Sbjct 441 TACTCTTTGGTGGTGATATTTGGCCTCACGGGCAACCTGCTCGTCGTCCTTATCCTGGTG 382 Query 8671 AAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGAC 8730 |||||||||||| | | || ||||| |||||| |||| |||||||||| || |||| Sbjct 381 AAGTACAAGAGGTTGAAGAGTATGACGGACATCTACCTGCTCAACCTGGCAATTTCTGAC 322 Query 8731 CTGCTGCTGATTTTCACCCTCCCCTTTTGG 8760 |||||| | || ||| | ||||| |||||| Sbjct 321 CTGCTGTTTATATTCTCTCTCCCGTTTTGG 292 >seq10813 Length=40973 Score = 91.5 bits (100), Expect = 2e-13 Identities = 110/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 8611 TACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCATA 8670 |||||| ||||| | | ||||| || | ||||| || || |||| |||| | Sbjct 30762 TACTCTTTGGTGGTGATATTTGGCCTCACGGGCAACCTGCTCGTCGTCCTTATCCTGGTG 30821 Query 8671 AAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGAC 8730 |||||||||||| | | || ||||| |||||| |||| |||||||||| || |||| Sbjct 30822 AAGTACAAGAGGTTGAAGAGTATGACGGACATCTACCTGCTCAACCTGGCAATTTCTGAC 30881 Query 8731 CTGCTGCTGATTTTCACCCTCCCCTTTTGG 8760 |||||| | || ||| | ||||| |||||| Sbjct 30882 CTGCTGTTTATATTCTCTCTCCCGTTTTGG 30911 Score = 91.5 bits (100), Expect = 2e-13 Identities = 110/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 8611 TACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCATA 8670 |||||| ||||| | | ||||| || | ||||| || || |||| |||| | Sbjct 37452 TACTCTTTGGTGGTGATATTTGGCCTCACGGGCAACCTGCTCGTCGTCCTTATCCTGGTG 37511 Query 8671 AAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGAC 8730 |||||||||||| | | || ||||| |||||| |||| |||||||||| || |||| Sbjct 37512 AAGTACAAGAGGTTGAAGAGTATGACGGACATCTACCTGCTCAACCTGGCAATTTCTGAC 37571 Query 8731 CTGCTGCTGATTTTCACCCTCCCCTTTTGG 8760 |||||| | || ||| | ||||| |||||| Sbjct 37572 CTGCTGTTTATATTCTCTCTCCCGTTTTGG 37601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583033922344800