Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Buceros_20rhinoceros_20silvestris_20[refseq_20GCF_5F000710305.1_2020
14-06-25] 62,257 sequences; 1,065,782,791 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq27582 111 2e-19
seq40441 96.9 4e-15
>seq27582
Length=3938
Score = 111 bits (122), Expect = 2e-19
Identities = 163/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| |||||||| |||| ||| | ||| || ||||| ||||| || |||||||| |||
Sbjct 3478 CCACCTCTGAGACGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAATCGGAC 3537
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | ||| || ||||| ||||| ||||| |||| | |||||||||||| ||
Sbjct 3538 AAGGTGCGTCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGA 3597
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|||||||| || || || || || || || || | ||||| | || ||
Sbjct 3598 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACC 3657
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
||||| || ||||| || || || | || || || || || ||||| |||
Sbjct 3658 TCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATGTTG 3708
Score = 109 bits (120), Expect = 6e-19
Identities = 110/143 (77%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| |||||||| |||| ||| | ||| |||||||| ||||| |||||||||||||||
Sbjct 3022 CCACCTCTGAGACGCAGCACCAAGTGCAGCGTGGACTCCTTCTGAATGTTGTAGTCGGAC 3081
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | ||| || ||||| ||||| ||||| |||| | ||||||||| || ||
Sbjct 3082 AGAGTGCGTCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGAGGA 3141
Query 134607 ATGCCTTCTTTTTCTTGAATTTT 134629
|||||||| || || || || ||
Sbjct 3142 ATGCCTTCCTTGTCCTGGATCTT 3164
Score = 105 bits (116), Expect = 7e-18
Identities = 109/143 (76%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| |||||||| |||| ||| ||||| || ||||| ||||| || ||||||||||||
Sbjct 2566 CCACCTCTGAGACGCAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 2625
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| || || || ||||| ||||| ||||| |||| | ||||||||| || ||
Sbjct 2626 AGGGTACGACCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGAGGA 2685
Query 134607 ATGCCTTCTTTTTCTTGAATTTT 134629
|||||||| || || || || ||
Sbjct 2686 ATGCCTTCCTTGTCCTGGATCTT 2708
Score = 105 bits (116), Expect = 7e-18
Identities = 109/143 (76%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| |||||||| |||| ||| | ||| || ||||| ||||| || |||||||| |||
Sbjct 3250 CCACCTCTGAGACGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAATCGGAC 3309
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | ||| || ||||| ||||| ||||| |||| | |||||||||||| ||
Sbjct 3310 AAGGTGCGTCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGA 3369
Query 134607 ATGCCTTCTTTTTCTTGAATTTT 134629
|||||||| || || || || ||
Sbjct 3370 ATGCCTTCCTTGTCCTGGATCTT 3392
Score = 98.7 bits (108), Expect = 1e-15
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || || || |||| ||| ||||| || ||||| ||||| || ||||||||||||
Sbjct 2338 CCACCCCTCAGGCGCAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 2397
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | || || ||||| ||||| ||||| |||| | |||||||||||| ||
Sbjct 2398 AGAGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGA 2457
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|||||||| || || || || || || || || | ||||| | || ||
Sbjct 2458 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCAACC 2517
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || ||||| || || || | || || || || || |||||
Sbjct 2518 TCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 2564
Score = 95.1 bits (104), Expect = 1e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 134499 CGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAG 134558
|||| ||| || || || ||||| ||||| || |||||||||||| | ||| | |
Sbjct 2806 CGCAGCACAAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCG 2865
Query 134559 TCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTT 134618
|| || ||||| ||||| ||||| |||| | |||||||||||| || |||||||| ||
Sbjct 2866 TCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCCTTG 2925
Query 134619 TCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATG 134678
|| || || || || || || | ||||| | || || ||||| || |||
Sbjct 2926 TCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATG 2985
Query 134679 GTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || || | || || || || || |||||
Sbjct 2986 GTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 3020
>seq40441
Length=3214
Score = 96.9 bits (106), Expect = 4e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || || || |||| |||||| || || ||||| ||||| || |||||||||||
Sbjct 380 CCACCCCTCAGGCGCAGCACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 321
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| || || || ||||| ||||| || || |||| | |||||||||||| ||
Sbjct 320 AGGGTACGACCATCTTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGGGGA 261
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|||||||| || || || || || || || || | ||||| | || ||
Sbjct 260 ATGCCTTCCTTGTCCTGGATCTTAGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACC 201
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
|| || || ||||| || || || | || || || || || |||||||||
Sbjct 200 TCAAGCGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATTTTG 150
Score = 93.3 bits (102), Expect = 4e-14
Identities = 108/146 (74%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG 134543
|| || || || || |||| ||| ||||| || ||||| ||||| || |||||||||||
Sbjct 839 TTACCACCCCTCAGGCGCAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCA 780
Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603
| ||| || || || ||||| ||||| || || |||| | ||||||||||||
Sbjct 779 GACAGGGTACGACCATCTTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGG 720
Query 134604 GGTATGCCTTCTTTTTCTTGAATTTT 134629
|| |||||||| || || || || ||
Sbjct 719 GGGATGCCTTCCTTGTCCTGGATCTT 694
Score = 91.5 bits (100), Expect = 1e-13
Identities = 106/143 (74%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || || || |||| ||| ||||| || ||||| ||||| || |||||||||||
Sbjct 608 CCACCCCTCAGGCGCAGCACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 549
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| || || || ||||| ||||| || || |||| | |||||||||||| ||
Sbjct 548 AGGGTACGACCATCTTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGGGGA 489
Query 134607 ATGCCTTCTTTTTCTTGAATTTT 134629
|||||||| || || || || ||
Sbjct 488 ATGCCTTCCTTGTCCTGGATCTT 466
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505005092647640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |