Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Buceros_20rhinoceros_20silvestris_20[refseq_20GCF_5F000710305.1_2020
14-06-25] 62,257 sequences; 1,065,782,791 total letters
Query= NC_028379.1
Length=205896
Score E
Sequences producing significant alignments: (Bits) Value
seq43062 118 1e-21
seq50785 111 2e-19
>seq43062
Length=24714
Score = 118 bits (130), Expect = 1e-21
Identities = 256/373 (69%), Gaps = 24/373 (6%)
Strand=Plus/Minus
Query 13695 TTTCCCATCGCCTACTCGATCGTGATCCACCACAAGA---TCGAGATGTTCGAGCGCCTC 13751
|| |||||||||||| || ||| || |||||| | |||| |||||||| |||
Sbjct 7625 TTCCCCATCGCCTACG---TCATGACCCTGCACAAGGAGTTTGAGACCTTCGAGCGGCTC 7569
Query 13752 CTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGACTCCAAGTCCGGC 13811
| ||||| | ||| || || ||| |||||||| |||||||||| ||||| ||
Sbjct 7568 TTCAGGGCAGTGTACATGCCCCAAAACATCTACTGCATCCACGTGGATGCCAAG----GC 7513
Query 13812 GACGAGTTCAT--CCGGG--GCGTCTCGGCCATCGCCAGG-TGCTTCCCTAACGTGGCCC 13866
| | || || | || | ||| ||||| || || |||||||| || | | ||
Sbjct 7512 GCC-AGCTCTTTTCCAGCAAGCGGTTCGGCGCCTGCTGGGCTGCTTCCCCAATGCGTTCC 7454
Query 13867 TGGCC-CACCGGCTGCACGACGTGGTGTACGGCT---CCTGGAGTCGCGTGCAGGCCGAC 13922
| || ||| || | || ||||| || ||| ||| ||| ||| ||| |||
Sbjct 7453 TCTCCTCACAGGTGGAGCGG-GTGGTCTATGGCGGTGCCTCC---CGCCTGCGGGCTGAC 7398
Query 13923 CTCAGCTGCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGTACCTGCTCAACCTG 13982
||| ||||||| |||||| ||||| |||| ||| | ||||||||||||
Sbjct 7397 CTCCACTGCATGAGAGACCTGTTGGCCTCGGCCGTGCCCTGGCGCTACCTGCTCAACACC 7338
Query 13983 TGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCGCTGAAGGCCCTG 14042
||||| |||||| || | |||||||||| ||||||||| ||| |||||||| |||
Sbjct 7337 TGCGGCCAGGACTTTCCCTTGAAGACCAACCGGGAGATCGTCCGGCTGCTGAAGGGCCTT 7278
Query 14043 GGCGGCAAGAACG 14055
|| || |||||||
Sbjct 7277 GGGGGGAAGAACG 7265
>seq50785
Length=242
Score = 111 bits (122), Expect = 2e-19
Identities = 87/104 (84%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 13671 CCCCTGAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAG 13730
|| ||||||| ||| |||| ||||| |||||||||||||| || || |||||| ||||
Sbjct 106 CCGCTGAGCCAGGAGGAGGCAGAGTTCCCCATCGCCTACTCCATGGTCATCCACAACAAA 47
Query 13731 ATCGAGATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCA 13774
||||||||||||||||| ||||| || || |||||||||| ||
Sbjct 46 ATCGAGATGTTCGAGCGGCTCCTCCGGTCCCTCTACGCCCCCCA 3
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658226560920320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |