Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Buceros_20rhinoceros_20silvestris_20[refseq_20GCF_5F000710305.1_2020
14-06-25] 62,257 sequences; 1,065,782,791 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq21600 82.4 7e-11
>seq21600
Length=11202
Score = 82.4 bits (90), Expect = 7e-11
Identities = 105/145 (72%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958
|| || || |||||||| ||||||||||| || || || || ||||| || ||||| ||
Sbjct 8996 TATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGTCCCAAATCTCCCTCTTCT 9055
Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018
| | || ||| |||| ||||| || || || || || | ||| ||||| ||||||
Sbjct 9056 CTGGTGCTAAAACCCTGCTTATCCAGGAACTCACGTGATCCATTAGCATCCCAAATCTTC 9115
Query 7019 ACCCCCCGGGACGAGAGCTCCTTGG 7043
|| || | |||||||| ||||
Sbjct 9116 ACACCTTTTGCAGAGAGCTCTTTGG 9140
Score = 82.4 bits (90), Expect = 7e-11
Identities = 105/145 (72%), Gaps = 0/145 (0%)
Strand=Plus/Minus
Query 34302 CCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTC 34361
|||| |||||||| | || |||||||| ||||| ||| | || || || || || |
Sbjct 9140 CCAAAGAGCTCTCTGCAAAAGGTGTGAAGATTTGGGATGCTAATGGATCACGTGAGTTCC 9081
Query 34362 TGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCC 34421
|||| |||| ||| || | | || ||||| || ||||| || || || || ||||
Sbjct 9080 TGGATAAGCAGGGTTTTAGCACCAGAGAAGAGGGAGATTTGGGACCAGTTTATGGTTTCC 9021
Query 34422 AGTGGAGACACTTTGGGGCGGAGTA 34446
||||||| |||||||| || || ||
Sbjct 9020 AGTGGAGGCACTTTGGAGCAGAATA 8996
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447913556597040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |