Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Buceros_20rhinoceros_20silvestris_20[refseq_20GCF_5F000710305.1_2020
14-06-25] 62,257 sequences; 1,065,782,791 total letters
Query= NC_029255.1
Length=129563
Score E
Sequences producing significant alignments: (Bits) Value
seq24833 111 1e-19
seq21600 96.9 3e-15
>seq24833
Length=6987
Score = 111 bits (122), Expect = 1e-19
Identities = 103/131 (79%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 3254 GAGCTCTTCCGAGATGGGGTAAACTGGGGGCGCATTGTTGCTTTCTTTGAGTTTGGTGGT 3313
||||||| |||||||||||| |||||||| | ||||| || ||||| |||||||||||
Sbjct 6506 GAGCTCTGCCGAGATGGGGTTAACTGGGGCAGAATTGTGGCCTTCTTCGAGTTTGGTGGC 6447
Query 3314 GTTATGTGTGTGGAAAGCGTCAATAGAGGCATACCCTCCCTCGTTGACAACATTGCCGCG 3373
|| ||||| ||||| |||||||| | | || | |||| || |||| ||| || ||
Sbjct 6446 GTGATGTGCGTGGAGAGCGTCAACCGGGAGATGTCTCCCCTTGTAGACAGCATCGCTGCC 6387
Query 3374 TGGATGACAGA 3384
|||||||| ||
Sbjct 6386 TGGATGACCGA 6376
>seq21600
Length=11202
Score = 96.9 bits (106), Expect = 3e-15
Identities = 118/161 (73%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 118534 AGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGA 118593
|||||||| | || |||||||||||||| | || |||||||| | ||| |||||
Sbjct 5019 AGCCCTGTGACATGGGCAATCATGTATGTGAGCAGTGAATAGCTGGCAATATTGAAAGGC 5078
Query 118594 ACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCA 118653
|| || || ||||| ||| | || ||||| || | ||||||||| | || || ||| |
Sbjct 5079 ACTCCTAGTCCCATATCTCCAGACCTCTGATAGAGTTGGCAAGACAATTCACCATTTAGA 5138
Query 118654 ACATAAAACTGACTTATGATGTGACATGGAGGCAGAACCAT 118694
||||| ||||| | | | || |||||||||| | ||||
Sbjct 5139 ACATAGAACTGGCAAAGGGCATGGCATGGAGGCAAAGCCAT 5179
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414162312748948
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |