Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Buceros_20rhinoceros_20silvestris_20[refseq_20GCF_5F000710305.1_2020
14-06-25] 62,257 sequences; 1,065,782,791 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq27582 87.8 1e-12
>seq27582
Length=3938
Score = 87.8 bits (96), Expect = 1e-12
Identities = 93/123 (76%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942
||||| ||||| |||| || ||||| || | || ||||| || || || ||||
Sbjct 3383 GACAAGGAAGGCATTCCTCCCGATCAGCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAA 3324
Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002
|||| ||||| ||||||||||||||||||||| || ||| ||| |||| ||||| ||
Sbjct 3323 GACGGACGCACCTTGTCCGATTACAACATCCAGAAGGAGTCCACCCTGCACTTGGTGCTG 3264
Query 28003 CGT 28005
|||
Sbjct 3263 CGT 3261
Score = 87.8 bits (96), Expect = 1e-12
Identities = 93/123 (76%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942
||||| ||||| |||| || ||||| || | || ||||| || || || ||||
Sbjct 3611 GACAAGGAAGGCATTCCTCCCGATCAGCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAA 3552
Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002
|||| ||||| ||||||||||||||||||||| || ||| ||| |||| ||||| ||
Sbjct 3551 GACGGACGCACCTTGTCCGATTACAACATCCAGAAGGAGTCCACCCTGCACTTGGTGCTG 3492
Query 28003 CGT 28005
|||
Sbjct 3491 CGT 3489
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355592386846239
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |