Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Buceros_20rhinoceros_20silvestris_20[refseq_20GCF_5F000710305.1_2020
14-06-25] 62,257 sequences; 1,065,782,791 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq21600 98.7 8e-16
seq23237 96.9 3e-15
>seq21600
Length=11202
Score = 98.7 bits (108), Expect = 8e-16
Identities = 122/162 (75%), Gaps = 4/162 (2%)
Strand=Plus/Plus
Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCT-GTGCTCGAA 30075
|| |||||||||||||| || || || ||||||| ||||||||||| || ||||| ||
Sbjct 9008 AAGTGCCTCCACTGGAAACCATAAACTGGTCCCAAATCTCCCTCTTCTCTGGTGCT-AAA 9066
Query 30076 GCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTC 30135
||| ||| |||| || || | || || || || ||||| ||||| || || || |
Sbjct 9067 ACCCTGCTTATCCAGGAACTCACGTGATCCATTAGCATCCCAAATCTTCACACCTTTTGC 9126
Query 30136 GGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAG 30177
||||||||||||| ||||| || || || || || |||||
Sbjct 9127 AGAGAGCTCTTTGGCATTTGTAGAACC-CT-ACAAAACACAG 9166
>seq23237
Length=6024
Score = 96.9 bits (106), Expect = 3e-15
Identities = 86/108 (80%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 114284 TTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 114343
|| |||||||||||||| |||| || | ||||| | ||| ||| | |||||| || ||
Sbjct 2185 TTGAGCTCCCTGCTGAGAACTATATTAATCCTGTTTTTCAAAGGACGATTCTTCTCAGGA 2126
Query 114344 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTACCT 114391
||||||||||| || ||| |||||||||||| | ||||| ||||||
Sbjct 2125 ATGGAGAACCAGGTTTTTTTACCCATTATCAGTGCATTCTGTTTACCT 2078
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405855020752702
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |