Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Buceros_20rhinoceros_20silvestris_20[refseq_20GCF_5F000710305.1_2020
14-06-25] 62,257 sequences; 1,065,782,791 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq35559 113 4e-20
seq41089 104 2e-17
>seq35559
Length=19442
Score = 113 bits (124), Expect = 4e-20
Identities = 106/134 (79%), Gaps = 1/134 (1%)
Strand=Plus/Minus
Query 4562 ATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACC 4621
|| || |||| | |||||||| || ||||| |||||||| || | || |||||||| ||
Sbjct 2952 ATTCATACCT-CATCTCTGCTGATGAGTTCATTAGAAAAAGTGAGCCCAGGCATTAATCC 2894
Query 4622 TCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGC 4681
||| || || |||||||| || | ||||| || ||||| ||||| || ||||| || ||
Sbjct 2893 TCTTTTCTTCAGCCAAAAAATTGATGCAAAAGAGCCAGAGAAGAAGATTCCTTCCACTGC 2834
Query 4682 GGCAAACGCTACTA 4695
|||||||||||||
Sbjct 2833 TGCAAACGCTACTA 2820
>seq41089
Length=22409
Score = 104 bits (114), Expect = 2e-17
Identities = 96/122 (79%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631
|| ||||||||||| ||||| || || || || | ||| ||||| | || ||||| ||
Sbjct 10926 TCATCTCTGCTAATAAGTTCATTGGAGAAAGTCAGTCCAGGCATCAGGCCCCTCTTCTTC 10867
Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691
|||||||||||||| ||||| || || ||||| || |||||||| || || ||||| ||
Sbjct 10866 AGCCAAAATATAGCAGCAAAGGAACCCGAAAAAAAGATGCCTTCAACTGCAGCAAAGGCA 10807
Query 4692 AC 4693
||
Sbjct 10806 AC 10805
Score = 87.8 bits (96), Expect = 2e-12
Identities = 95/126 (75%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 4925 TCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATG 4984
|||| ||| | |||||| ||||| || || ||||||||||||||||| |||| ||||||
Sbjct 5522 TCTTCTTACCAGGTTTTCATTTACAATTCCATCACTGGCTGCAAAAAATGCCAGAACATG 5463
Query 4985 AGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAA 5044
|| ||||||| | ||| || | || || | |||||||| || | || || | ||
Sbjct 5462 TGAGATAAAGTGTTTTTCATCTGCTTTCAGCCTGTTCCAGTGAGGAAGGTCCTTTGACAA 5403
Query 5045 ATCAAC 5050
||||||
Sbjct 5402 ATCAAC 5397
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 426725573046581
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |