Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Buceros_20rhinoceros_20silvestris_20[refseq_20GCF_5F000710305.1_2020
14-06-25] 62,257 sequences; 1,065,782,791 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq35559 95.1 2e-14
seq41089 84.2 3e-11
>seq35559
Length=19442
Score = 95.1 bits (104), Expect = 2e-14
Identities = 87/110 (79%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 47835 GACATAACTCCCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCT 47894
||||| |||||||| | ||||||||||| || || ||||| || || || || ||||||
Sbjct 4214 GACATGACTCCCATCCTCTGATATTCACCTACTCGCTTCTCAAAGAAGTTGGTCTTGCCT 4155
Query 47895 TCCAATGATATATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAT 47944
|||| || || |||||||| || ||||| ||||| |||| ||||| ||
Sbjct 4154 TCCAGAGAGATGTTTTCCATGAAGTCAAAAGGATTCTCTGCTTTATATAT 4105
>seq41089
Length=22409
Score = 84.2 bits (92), Expect = 3e-11
Identities = 90/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 48165 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTG 48224
|||||||| ||||| | ||| || || || || || || ||||| || || | || ||
Sbjct 10926 TCATCTCTGCTAATAAGTTCATTGGAGAAAGTCAGTCCAGGCATCAGGCCCCTCTTCTTC 10867
Query 48225 AGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGC 48283
||||||||||| || || || || || ||||| || |||||||| || || ||||| ||
Sbjct 10866 AGCCAAAATATAGCAGCAAAGGAACCCGAAAAAAAGATGCCTTCAACTGCAGCAAAGGC 10808
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694128200056480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |