Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Buceros_20rhinoceros_20silvestris_20[refseq_20GCF_5F000710305.1_2020
14-06-25] 62,257 sequences; 1,065,782,791 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq41089 102 1e-16
seq35559 98.7 1e-15
>seq41089
Length=22409
Score = 102 bits (112), Expect = 1e-16
Identities = 103/134 (77%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 46654 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTG 46713
|||||||| ||||| | ||| || || || || || |||||||| || || | ||| ||
Sbjct 10926 TCATCTCTGCTAATAAGTTCATTGGAGAAAGTCAGTCCAGGCATCAGGCCCCTCTTCTTC 10867
Query 46714 AGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCG 46773
|||||||||||||| || || || || ||||| || |||||||| || || || || ||
Sbjct 10866 AGCCAAAATATAGCAGCAAAGGAACCCGAAAAAAAGATGCCTTCAACTGCAGCAAAGGCA 10807
Query 46774 ACAAGTCTCTCTCC 46787
|| | |||||| ||
Sbjct 10806 ACCACTCTCTCACC 10793
>seq35559
Length=19442
Score = 98.7 bits (108), Expect = 1e-15
Identities = 95/122 (78%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 46654 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTG 46713
|||||||| || || | ||| |||||||| |||||||||||||||| ||| | || ||
Sbjct 2943 TCATCTCTGCTGATGAGTTCATTAGAAAAAGTGAGCCCAGGCATTAATCCTCTTTTCTTC 2884
Query 46714 AGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCG 46773
|||||||| || | || ||||| ||||| ||||| || ||||| || || || || ||
Sbjct 2883 AGCCAAAAAATTGATGCAAAAGAGCCAGAGAAGAAGATTCCTTCCACTGCTGCAAACGCT 2824
Query 46774 AC 46775
||
Sbjct 2823 AC 2822
Score = 87.8 bits (96), Expect = 3e-12
Identities = 77/96 (80%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 46323 TGACATAACTCCCATTTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCC 46382
|||||| |||||||| | || ||||||||||| || ||||| || || || || |||||
Sbjct 4215 TGACATGACTCCCATCCTCTGATATTCACCTACTCGCTTCTCAAAGAAGTTGGTCTTGCC 4156
Query 46383 TTCCAATGATATATTTTCCATAAAATCAAACGGATT 46418
||||| || || |||||||| || ||||| |||||
Sbjct 4155 TTCCAGAGAGATGTTTTCCATGAAGTCAAAAGGATT 4120
Score = 84.2 bits (92), Expect = 3e-11
Identities = 82/106 (77%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 46890 ATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGC 46949
|||||||| || || || || | |||||| |||||||||||||| |||||||| || ||
Sbjct 890 ATCTTTAATGTAGGTGTCAATAAGAAGACTGTACATTTCTGAATGTATGTTTTCCATGGC 831
Query 46950 CATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCT 46995
||||| || || || ||||| | ||||| || | ||||| |||
Sbjct 830 AATCTGGAAGCCATAGAAACAACGAGCTTCTGTGACTTGTACTTCT 785
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712379585538240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |