Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Callipepla_20squamata_20[genbank_20GCA_5F002218305.1_202017-07-13] 34,302 sequences; 1,045,281,893 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq470 105 8e-18 >seq470 Length=704619 Score = 105 bits (116), Expect = 8e-18 Identities = 120/161 (75%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809 || || |||| ||||| | |||||| || ||||| || |||||||| || ||||| ||| Sbjct 26753 AGCCCTGTGACATGGGCAATCATGTATGTGAGCAGCGAATAGCTGGCAATATTGAAAGGC 26812 Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC 145869 || || || ||||| || || || | ||||||||| ||||| || || || || | Sbjct 26813 ACTCCTAGTCCCATATCTCCAGACCTCTGGTACAGTTGGCAAGACAGTTCACCATTCAGA 26872 Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910 || ||||||||||| || ||||| ||||||| ||||| Sbjct 26873 ACATAGAACTGGCAGAGAGCATGGCAAGGCGGCAAAGCCAT 26913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589823789820080