Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Callipepla_20squamata_20[genbank_20GCA_5F002218305.1_202017-07-13] 34,302 sequences; 1,045,281,893 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq470 118 8e-22 >seq470 Length=704619 Score = 118 bits (130), Expect = 8e-22 Identities = 128/170 (75%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 20388 AGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAA 20447 |||| | || | ||||||||||| || || ||| || ||||| || || ||| || Sbjct 26926 AGATATTTCTCTGATGGCTTTGCCGCCTTGCCATGCTCTCTGCCAGTTCTATGTTCTGAA 26867 Query 20448 TAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTT 20507 | |||| |||| || ||| |||| || | || | ||||||||||| || || ||||| Sbjct 26866 TGGTGAACTGTCTTGCCAACTGTACCAGAGGTCTGGAGATATGGGACTAGGAGTGCCTTT 26807 Query 20508 CAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAG 20557 ||||||||| || ||| ||||||| || || |||||||| ||||| |||| Sbjct 26806 CAATATTGCCAGCTATTCGCTGCTCACATACATGATTGCCCATGTCACAG 26757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399017118883390