Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Callipepla_20squamata_20[genbank_20GCA_5F002218305.1_202017-07-13] 34,302 sequences; 1,045,281,893 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq184 82.4 8e-11 >seq184 Length=1437213 Score = 82.4 bits (90), Expect = 8e-11 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 93164 CCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACG 93223 |||| |||||| ||||| || ||||| |||||| |||||||| || || |||||||| Sbjct 73959 CCTCTTTTCTTCAGCCAGAAAATTGATGCAAAAGAGCCAGAAAAGAAGATGCCTTCCACT 73900 Query 93224 GCTGCAAATGCCACAATACGTTC 93246 ||||||||||| || | |||||| Sbjct 73899 GCTGCAAATGCTACCACACGTTC 73877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556622032010480