Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Callipepla_20squamata_20[genbank_20GCA_5F002218305.1_202017-07-13] 34,302 sequences; 1,045,281,893 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq518 82.4 9e-11 >seq518 Length=643042 Score = 82.4 bits (90), Expect = 9e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 126080 ATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATC 126139 || |||||||| ||||| || ||| ||||| || |||| |||||||| ||| || || Sbjct 337100 ATAAGTTCATTGGAGAAAGTCAATCCAGGCATCAGGCCCCTCTTCTTCAGCCAAAATATA 337159 Query 126140 GCACAAAATGAACCCGAGAAGAAGATTCCCTCCAC 126174 ||| |||||||||||| |||||||| || || || Sbjct 337160 GCAGCAAATGAACCCGAAAAGAAGATGCCTTCAAC 337194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597097469710160