Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Callipepla_20squamata_20[genbank_20GCA_5F002218305.1_202017-07-13] 34,302 sequences; 1,045,281,893 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq44 89.7 2e-12 >seq44 Length=2569273 Score = 89.7 bits (98), Expect = 2e-12 Identities = 93/121 (77%), Gaps = 1/121 (1%) Strand=Plus/Plus Query 451306 TTCTCCAG-TTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGC 451364 || ||||| ||||| |||| || ||||||| || ||||| ||||||||||| || || | Sbjct 805338 TTTTCCAGGTTACTCATGCTGTTGTTACTGTGCCAGCTTACTTCAATGATGCTCAGCGTC 805397 Query 451365 AAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAAC 451424 | || || |||||||| || ||||||||| || || || | || |||||||| || | Sbjct 805398 AGGCCACAAAAGATGCTGGCACTATTGCTGGGTTGAACGTGATGCGCATTATTAACGAGC 805457 Query 451425 C 451425 | Sbjct 805458 C 805458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1974850082876616