Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Callipepla_20squamata_20[genbank_20GCA_5F002218305.1_202017-07-13] 34,302 sequences; 1,045,281,893 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq44 91.5 2e-13 >seq44 Length=2569273 Score = 91.5 bits (100), Expect = 2e-13 Identities = 119/162 (73%), Gaps = 2/162 (1%) Strand=Plus/Minus Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTC-ATGGCTGTTTGGTTCTT 7995 || || || ||||| |||||||| || ||||| | ||||| ||| | | | ||||||| Sbjct 804744 CCTATGAGCCGCTTGGCATCAAACACGGTGTTCTCAGGGTTGGATGTCAGCT-GGTTCTT 804686 Query 7996 CGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGT 8055 ||||| |||||||| || || || | ||| || || ||||| || || || | Sbjct 804685 GGCCGCATCCCCGATCAGGCGCTCCCCCTCGGGCGTGAATGCCACGTAGGACGGCGTGAT 804626 Query 8056 TCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTT 8097 || ||||| |||||||| || || |||||||||||| |||| Sbjct 804625 GCGGTTCCCCTGGTCGTTGGCGATGATTTCTACGCGGCCGTT 804584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634860470933680