Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Callipepla_20squamata_20[genbank_20GCA_5F002218305.1_202017-07-13] 34,302 sequences; 1,045,281,893 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq371 358 9e-94 seq448 185 1e-41 seq384 179 5e-40 seq82 172 7e-38 seq44 87.8 2e-12 >seq371 Length=876940 Score = 358 bits (396), Expect = 9e-94 Identities = 1047/1596 (66%), Gaps = 35/1596 (2%) Strand=Plus/Minus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358 || || || |||||| | || || || || || || || ||||| | || | | Sbjct 728355 GCCATCGGCATCGATCTGGGCACCACGTATTCTTGCGTGGGTGTCTTCCAGCACGGCAAA 728296 Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 || ||||| ||| | || ||||| |||||||| || || || || || || || || Sbjct 728295 GTGGAGATCATCGCCAACGACCAGGGAAACCGCACCACGCCCAGCTATGTGGCTTTCACC 728236 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 |||| || || ||| |||| ||||| || || || || || |||||||| | ||| Sbjct 728235 GATACGGAGCGCCTCATTGGGGATGCTGCCAAGAACCAAGTGGCGATGAACCCCACCAAC 728176 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538 || |||| || || |||||||| || || ||||||| | || | || || Sbjct 728175 ACCATCTTCGATGCCAAGCGTCTCATCGGCCGCAAGTATGATGACCCCACGGTGCAGTCG 728116 Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTCCCG-GTGTGGCTGATAAGCCTATGATTAA 195597 || || ||| | ||| | | || || || | ||||| ||||| | | | | Sbjct 728115 GACATGAAGCATTGGCCCTTCCGCGTAGTGAACGAGGGTGGC----AAGCCCAAGGTGCA 728060 Query 195598 TGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTT 195657 || || | | || |||| ||| || ||| ||||| || || |||||| | Sbjct 728059 AGTGGAGTACAAGGGCGAGATGAAGACCTTCTTTCCAGAAGAGATCAGCTCCATGGTGCT 728000 Query 195658 GATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGT 195717 | ||||||||||||| || || ||| |||| || | ||| | | || ||| | Sbjct 727999 TACCAAGATGAAGGAGATCGCTGAGGCTTATCTGGGGAAGAAGGTGCAGAACGCTGTTAT 727940 Query 195718 GACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTAT 195777 || || ||||||||||||| ||| || || || ||||| || || || |||| | || Sbjct 727939 CACAGTGCCTGCTTACTTCAATGACTCCCAGCGCCAGGCCACCAAAGATGCTGGCACCAT 727880 Query 195778 TGCGGGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATG 195836 | || || || ||| | | |||||||| || || ||||| ||||| ||||| |||| Sbjct 727879 CACTGGCCTTAA-TGTGATGCGTATTATCAACGAGCCCACAGCAGCTGCTATTGCCTATG 727821 Query 195837 GTCTGGACAAGAA------CAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTG 195890 | |||||||||| | || | ||| || ||||| | |||||||| | || | Sbjct 727820 GCTTGGACAAGAAAGGTACCCGGGCTGGAGAGAAGAATGTGCTCATCTTTGACTTGGGAG 727761 Query 195891 GTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTA 195950 | || || |||||||| || | || | ||||| | ||| || || || || ||| ||| Sbjct 727760 GGGGCACTTTTGATGTATCCATCCTTACCATTGAGGATGGCATCTTTGAGGTGAAGTCTA 727701 Query 195951 CTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGT 196010 | ||||| || || || || ||||| || || || || ||| | | ||||| Sbjct 727700 CGGCTGGGGACACCCACCTGGGTGGGGAGGACTTTGACAACCGTATGGTGAACCATTTTG 727641 Query 196011 CTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTC 196070 || |||||| || ||| | ||| || ||| |||| ||| | || | | | Sbjct 727640 TGGAAGAGTTCAAGCGTAAGCACAAGCGTGACATTGCTGGCAATAAGCGAGCAGTGAGGC 727581 Query 196071 GGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCT---CTCTTCTACGGCTCAAACAA 196127 |||| | || || || || | || ||||| ||||| |||||| | | ||| | | Sbjct 727580 GGCTGCGCACAGCTTGCGAGAGGGCGAAACGCACTCTGAGCTCTTCCA---CACAAGCCA 727524 Query 196128 TGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCAC 196187 |||||||||| || | || || || ||||||||||| || |||| || ||||| | Sbjct 727523 GCATTGAGATTGACTCCCTCTTCGAGGGCATTGACTTCTACACCTCTATCACTCGTGCCC 727464 Query 196188 GTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGT-GTATGGAACCTGTTGAACAAGTA 196246 | ||||| ||| | || | || | ||| | || | |||| || || || | | Sbjct 727463 GCTTTGAGGAGCTCAATGCCGACCT-TTTCCGTGGTACTCTGGAGCCAGTGGAGAAGGCC 727405 Query 196247 CTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCA 196306 || ||||| || ||| | || ||| || | | || || || |||||||| || || Sbjct 727404 CTGCGTGATGCCAAGCTTGACAAGGGCCAGATCCAGGAGATCGTGCTTGTGGGGGGCTCC 727345 Query 196307 ACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAAC 196366 || ||||| || ||||| || || ||||| |||||||||| ||||| | ||| Sbjct 727344 ACTCGTATCCCTAAGATCCAGAAGTTGCTTCAGGACTTCTTCAATGGCAAAGAGCTCAAC 727285 Query 196367 AAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTC 196426 || | ||||| || ||||| || |||||||| || || || || || || ||||| || Sbjct 727284 AAGAGCATCAATCCAGATGAGGCTGTTGCTTACGGCGCTGCGGTGCAAGCGGCTATCCT- 727226 Query 196427 TCAGGTGTTGACAA---TAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTA 196483 | | | ||||| | | ||||| |||||||| || || | ||||| | || | Sbjct 727225 TATG--GGAGACAAGTCTGAGAACGTGCAAGATCTGCTCCTGTTGGATGTCACCCCTCTG 727168 Query 196484 TCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACT 196543 |||||||| |||| || || || ||||| ||||| | || | | ||||| || Sbjct 727167 TCCCTGGGCATTGAGACGGCAGGCGGTGTGATGACAGCTCTCATCAAGCGTAACACCACG 727108 Query 196544 ATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCA-ACCAGGTGTTCA 196602 ||||| || || | || ||| | || || || || || || | || | || | Sbjct 727107 ATTCCCACCAAACAAACGCAGACCTTCACCACCTACTCAGACAACCAGAGCA-GCGTCCT 727049 Query 196603 TATTCAAGTATATGAAG--GAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAAC 196659 | || || ||||||| |||| ||| || | ||||| ||| | | || || | Sbjct 727048 CGTCCAGGTGTATGAAGGTGAGAGGGCT---ATGACGAAGGACAACAACTTGCTGGGCAA 726992 Query 196660 TTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTT 196719 || || | ||||| || || | |||||| | || || || |||||| | || || Sbjct 726991 GTTTGACCTAACGGGCATCCCCCCAGCACCCCGTGGGGTCCCTCAGATTGAGGTCACTTT 726932 Query 196720 CGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATC 196779 || ||||| || ||||| || || || |||| |||| ||||||| | || || Sbjct 726931 TGACATAGATGCGAATGGTATCCTGAATGTCAGCGCTGTGGACAAGAGCACAGGGAAGGA 726872 Query 196780 TGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTAT 196839 | ||||| || ||||| |||||||| || ||| || || || ||||| ||||| Sbjct 726871 GAACAAGATAACCATCACCAACGACAAGGGTCGCCTTAGCAAAGATGACATTGATCGTAT 726812 Query 196840 GGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGA 196875 ||| ||||| || || || |||| | ||| ||||| Sbjct 726811 GGTGCAAGAAGCAGAGAAATACAAAGCAGAGGACGA 726776 >seq448 Length=747048 Score = 185 bits (204), Expect = 1e-41 Identities = 168/212 (79%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||||| ||||| ||||| |||||| | ||||| ||| | Sbjct 684354 ATGCAGATCTTTGTGAAGACCCTGACTGGTAAAACCATCACCTTGGAGGTGGAGCCCAGT 684413 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| ||| |||| |||||||| || || ||||||||||| || ||||||||| Sbjct 684414 GACACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCCCCCGATCAG 684473 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || ||||||||||| || ||||| ||||| || || ||||| | || |||||| Sbjct 684474 CAGAGGCTGATTTTTGCTGGCAAGCAGCTGGAAGACGGGCGCACCCTGTCCGACTACAAC 684533 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | || |||||||| || || || ||||| || Sbjct 684534 ATCCAGAAGGAGTCCACCCTGCATCTTGTCCT 684565 Score = 181 bits (200), Expect = 1e-40 Identities = 177/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| ||| | ||||| ||||| |||||| | ||||| ||| | Sbjct 684582 ATGCAGATCTTCGTGAAGACCTTGACTGGTAAAACCATCACCTTGGAGGTGGAGCCCAGT 684641 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || || ||||| ||| |||| |||||||| || || ||||||||||| || ||||||||| Sbjct 684642 GATACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCCCCCGATCAG 684701 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || ||||||||||| || ||||| |||||||| || ||||| | || |||||| Sbjct 684702 CAGAGGCTGATTTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAAC 684761 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | || |||||||| || || ||||| || || | || |||||||| Sbjct 684762 ATCCAGAAGGAGTCCACCCTGCACCTGGTGCTGCGCCTGAGGGGTGGT 684809 Score = 170 bits (188), Expect = 3e-37 Identities = 165/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| ||||| || || || || |||||| | ||||| ||| | Sbjct 683884 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCTTGGAGGTGGAGCCCAGC 683943 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| ||| |||| |||||||| || || ||||||||||| || ||||||||| Sbjct 683944 GACACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCCCCCGATCAG 684003 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || ||||||||||| || ||||| |||||||| || ||||| | || |||||| Sbjct 684004 CAGAGGCTGATTTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAAC 684063 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | || |||||||| || || || || || || Sbjct 684064 ATCCAGAAGGAGTCCACCCTGCATCTCGTCCT 684095 Score = 127 bits (140), Expect = 3e-24 Identities = 112/140 (80%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 171934 AACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATT 171993 ||| |||| |||||||| || || ||||||||||| || ||||||||||| | || ||| Sbjct 684198 AACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCCCCCGATCAGCAGAGGCTGATT 684257 Query 171994 TTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAG 172053 |||||||| || ||||| |||||||| || ||||| | || |||||| | || |||||| Sbjct 684258 TTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAACATCCAGAAGGAG 684317 Query 172054 TCTACTCTACACCTTGTTCT 172073 || || || ||||| || || Sbjct 684318 TCCACCCTGCACCTGGTGCT 684337 >seq384 Length=852418 Score = 179 bits (198), Expect = 5e-40 Identities = 167/212 (79%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| ||||| ||||| || || |||||||| || |||||| | Sbjct 85992 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAAGTTGAGCCCAGT 85933 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || ||| | || |||||||| ||||| || ||||||||||| ||||||||| Sbjct 85932 GACACCATTGAAAACGTGAAGGCCAAGATCCAAGACAAAGAAGGCATTCCTCCCGATCAG 85873 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || || || |||||||| ||||| |||||||| || ||||| |||| |||||| Sbjct 85872 CAGAGGCTGATCTTCGCTGGTAAGCAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 85813 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | || |||||||| || || ||||| || || Sbjct 85812 ATCCAGAAGGAGTCCACCCTGCACCTGGTGCT 85781 Score = 176 bits (194), Expect = 6e-39 Identities = 166/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||||| ||||| || || ||||| |||||||| ||| | Sbjct 86448 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACGCTCGAGGTCGAGCCCAGT 86389 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || ||| | || |||||||| ||||| || ||||||||||| ||||||||| Sbjct 86388 GACACCATTGAAAACGTAAAGGCCAAGATCCAAGACAAAGAAGGCATTCCTCCCGATCAG 86329 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || || || ||||| || ||||| |||||||| || ||||| | || |||||| Sbjct 86328 CAGAGGCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAAC 86269 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | || |||||||| || || ||||| || || Sbjct 86268 ATCCAGAAGGAGTCCACCCTGCACCTGGTGCT 86237 Score = 161 bits (178), Expect = 1e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||||| ||||| || || ||||| || ||||| ||| | Sbjct 86676 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACTCTTGAGGTCGAGCCTAGC 86617 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || | || |||||||| ||||| || ||||||||||| ||||||||| Sbjct 86616 GACACCATAGAGAATGTGAAGGCCAAGATCCAAGACAAAGAAGGCATTCCTCCCGATCAG 86557 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || || || |||||||| ||||| ||||| || || ||||| |||| |||||| Sbjct 86556 CAGAGGCTGATCTTCGCTGGTAAGCAGCTGGAAGACGGGCGCACCCTGTCTGACTACAAC 86497 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | || || || || || || ||||| || || Sbjct 86496 ATCCAGAAAGAATCCACCCTGCACCTGGTGCT 86465 Score = 158 bits (174), Expect = 2e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||||||| | ||||| || || ||||| || ||||| ||| | Sbjct 86220 ATGCAGATCTTCGTGAAAACCTTGACTGGCAAGACAATCACTCTTGAGGTCGAGCCCAGT 86161 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || | || |||||||| ||||| || ||||||||||| ||||||||| Sbjct 86160 GACACCATAGAGAATGTGAAGGCCAAGATCCAAGACAAAGAAGGCATTCCTCCCGATCAG 86101 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || || ||||||||||| ||||| ||||| || || ||||| | || |||||| Sbjct 86100 CAGAGGCTGATCTTTGCTGGTAAGCAGCTGGAAGACGGGCGCACCCTGTCCGACTACAAC 86041 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | || || || || || || ||||| || || Sbjct 86040 ATCCAGAAAGAATCCACCCTGCACCTGGTGCT 86009 >seq82 Length=2126464 Score = 172 bits (190), Expect = 7e-38 Identities = 356/530 (67%), Gaps = 0/530 (0%) Strand=Plus/Minus Query 195875 ATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATA 195934 || ||||| ||||| ||||| || |||||||| || |||| | ||||||| ||| || Sbjct 1120734 ATATTTGACCTCGGAGGTGGCACCTTTGATGTGTCGATTCTGACGATTGAAGATGGCATC 1120675 Query 195935 TTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGT 195994 || || || || | || || ||||| |||||| | ||||| |||||||| || || Sbjct 1120674 TTTGAGGTGAAATCCACCGCGGGTGACACTCATTTGGGTGGAGAAGATTTTGACAACCGC 1120615 Query 195995 CTTCTCCGTCATTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAAT 196054 | || || || | ||||||| || ||| | ||||| || || || || Sbjct 1120614 ATGGTCAACCACTTCATCGCTGAGTTCAAGCGCAAGCACAAGAAGGACATCAGTGAGAAC 1120555 Query 196055 CCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCT 196114 || || ||||||| ||| | ||||| || || ||||| || || || || || || Sbjct 1120554 AAGAGAGCAGTTCGTCGCCTTCGTACTGCGTGCGAGCGTGCGAAGCGTACCCTGTCATCC 1120495 Query 196115 ACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACT 196174 | ||||| | | |||| || ||||| | | ||| || ||||||||||| || | Sbjct 1120494 AGCACTCAAGCCAGTATTGAAATCGATTCTCTCTATGAGGGCATTGACTTCTACACGTCG 1120435 Query 196175 ATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCT 196234 || ||| | || || || || ||| | ||| | || |||| | |||| ||| Sbjct 1120434 ATCACCAGAGCTCGCTTCGAGGAGCTGAACGCCGACCTGTTCCGTGGCACCCTGGATCCT 1120375 Query 196235 GTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTT 196294 || || | | || || || || ||| |||| ||||| || | | || || || || Sbjct 1120374 GTGGAGAAGGCCCTGCGGGATGCCAAGCTGGACAAGTCACAGATCCACGACATCGTGCTG 1120315 Query 196295 GTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAAT 196354 || || || || ||||| || || ||||| || || |||| |||||||||| Sbjct 1120314 GTTGGGGGGTCTACCCGCATCCCCAAGATCCAGAAGCTGCTGCAGGACTTCTTCAATGGC 1120255 Query 196355 AAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGC 196404 || || || ||||| | ||||| || |||||||| || ||||| ||||| Sbjct 1120254 AAGGAGTTGAACAAGAGCATCAATCCTGATGAAGCCGTAGCTTACGGTGC 1120205 Score = 98.7 bits (108), Expect = 1e-15 Identities = 109/143 (76%), Gaps = 2/143 (1%) Strand=Plus/Minus Query 195708 ATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACG 195767 |||| || || |||||||| || || || | || || || || ||||| ||||| || | Sbjct 1120977 ATGCTGTAGTCACTGTACCAGCCTATTTTAACGACTCCCAGCGGCAGGCCACAAAAGATG 1120918 Query 195768 CTGCTGCTATTGCGGGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCA 195826 ||| | ||||| || || || ||| || | |||||||| || |||||||| ||||| Sbjct 1120917 CTGGAACCATTGCAGGGCTGAA-TGTACTGCGGATTATCAACGAGCCAACAGCTGCTGCT 1120859 Query 195827 ATTGCTTATGGTCTGGACAAGAA 195849 || || ||||||||||||||||| Sbjct 1120858 ATAGCCTATGGTCTGGACAAGAA 1120836 >seq44 Length=2569273 Score = 87.8 bits (96), Expect = 2e-12 Identities = 126/174 (72%), Gaps = 3/174 (2%) Strand=Plus/Plus Query 195814 AACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATT 195873 ||| || ||||| ||||||||||| ||||||||| ||| || || || || || Sbjct 805547 AACTGCAGCTGCCATTGCTTATGGGTTGGACAAGAGAGAGGGTGA-GAAGAACATCC-TT 805604 Query 195874 GATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTAT 195933 | | ||||| || || ||||| || ||||||||||| ||||| | ||||| ||| | Sbjct 805605 G-TGTTTGACCTGGGCGGTGGAACTTTTGATGTCTCCCTTCTGACAATTGACAATGGAGT 805663 Query 195934 ATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 || ||||| |||||| |||||| || || || ||||| ||||| || || Sbjct 805664 CTTTGAAGTTGTGGCTACCAATGGTGACACACACCTGGGTGGAGAAGACTTTGA 805717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657580325049440