Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Callipepla_20squamata_20[genbank_20GCA_5F002218305.1_202017-07-13] 34,302 sequences; 1,045,281,893 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq1337 170 2e-36 seq1222 170 2e-36 seq102 170 2e-36 SEQ10189 165 1e-34 SEQ29186 161 1e-33 seq1637 161 1e-33 seq255 156 5e-32 seq127 91.5 2e-12 seq4704 86.0 8e-11 seq2286 86.0 8e-11 >seq1337 Length=46112 Score = 170 bits (188), Expect = 2e-36 Identities = 159/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | ||| |||||||| ||||||||||| |||| || Sbjct 18309 GCTTGGCCAGCTCGCCGGGCAGCAGCAGCCGCACGGCCGTCTGGATCTCCCGCGACGTGA 18250 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || |||||| | ||||||| |||| | Sbjct 18249 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCGGCGATGCGCTCGAAGA 18190 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| ||||||||| |||||||| Sbjct 18189 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 18130 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 18129 GCACCTGCTTCAGCACCTTGTA 18108 Score = 170 bits (188), Expect = 2e-36 Identities = 159/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | ||| |||||||| ||||||||||| |||| || Sbjct 24413 GCTTGGCCAGCTCGCCGGGCAGCAGCAGCCGCACGGCCGTCTGGATCTCCCGCGACGTGA 24354 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || |||||| | ||||||| |||| | Sbjct 24353 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCGGCGATGCGCTCGAAGA 24294 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| ||||||||| |||||||| Sbjct 24293 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 24234 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 24233 GCACCTGCTTCAGCACCTTGTA 24212 Score = 170 bits (188), Expect = 2e-36 Identities = 159/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | ||| |||||||| ||||||||||| |||| || Sbjct 44693 GCTTGGCCAGCTCGCCGGGCAGCAGCAGCCGCACGGCCGTCTGGATCTCCCGCGACGTGA 44634 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || |||||| | ||||||| |||| | Sbjct 44633 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCGGCGATGCGCTCGAAGA 44574 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| ||||||||| |||||||| Sbjct 44573 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 44514 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 44513 GCACCTGCTTCAGCACCTTGTA 44492 >seq1222 Length=82599 Score = 170 bits (188), Expect = 2e-36 Identities = 159/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | ||| |||||||| ||||||||||| |||| || Sbjct 911 GCTTGGCCAGCTCGCCGGGCAGCAGCAGCCGCACGGCCGTCTGGATCTCCCGCGACGTGA 852 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || |||||| | ||||||| |||| | Sbjct 851 TAGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCGGCGATGCGCTCGAAGA 792 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| ||||||||| |||||||| Sbjct 791 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 732 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 731 GCACCTGCTTCAGCACCTTGTA 710 Score = 170 bits (188), Expect = 2e-36 Identities = 159/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | ||| |||||||| ||||||||||| |||| || Sbjct 5414 GCTTGGCCAGCTCGCCGGGCAGCAGCAGCCGCACGGCCGTCTGGATCTCCCGCGACGTGA 5473 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || |||||| | ||||||| |||| | Sbjct 5474 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCGGCGATGCGCTCGAAGA 5533 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| ||||||||| |||||||| Sbjct 5534 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 5593 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 5594 GCACCTGCTTCAGCACCTTGTA 5615 >seq102 Length=1910416 Score = 170 bits (188), Expect = 2e-36 Identities = 159/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | ||| |||||||| ||||||||||| |||| || Sbjct 13149 GCTTGGCCAGCTCGCCGGGCAGCAGCAGCCGCACGGCCGTCTGGATCTCCCGCGACGTGA 13208 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || |||||| | ||||||| |||| | Sbjct 13209 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCGGCGATGCGCTCGAAGA 13268 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| ||||||||| |||||||| Sbjct 13269 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 13328 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 13329 GCACCTGCTTCAGCACCTTGTA 13350 Score = 170 bits (188), Expect = 2e-36 Identities = 159/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | ||| |||||||| ||||||||||| |||| || Sbjct 28000 GCTTGGCCAGCTCGCCGGGCAGCAGCAGCCGCACGGCCGTCTGGATCTCCCGCGACGTGA 28059 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || |||||| | ||||||| |||| | Sbjct 28060 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCGGCGATGCGCTCGAAGA 28119 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| ||||||||| |||||||| Sbjct 28120 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 28179 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 28180 GCACCTGCTTCAGCACCTTGTA 28201 Score = 170 bits (188), Expect = 2e-36 Identities = 159/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | ||| |||||||| ||||||||||| |||| || Sbjct 48827 GCTTGGCCAGCTCGCCGGGCAGCAGCAGCCGCACGGCCGTCTGGATCTCCCGCGACGTGA 48768 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || |||||| | ||||||| |||| | Sbjct 48767 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCGGCGATGCGCTCGAAGA 48708 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| ||||||||| |||||||| Sbjct 48707 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 48648 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 48647 GCACCTGCTTCAGCACCTTGTA 48626 Score = 161 bits (178), Expect = 1e-33 Identities = 157/202 (78%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | ||| |||||||| ||||||||||| |||| || Sbjct 19708 GCTTGGCCAGCTCGCCGGGCAGCAGCAGCCGCACGGCCGTCTGGATCTCCCGCGACGTGA 19649 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || |||||| | ||||||| |||| | Sbjct 19648 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCGGCGATGCGCTCGAAGA 19589 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | || ||||||||| |||||||| Sbjct 19588 TGTCGTTGACGAACGAGTTCATGATGCTCATGGCTTTAGACGAGATGCCCGTGTCGGGGT 19529 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 19528 GCACCTGCTTCAGCACCTTGTA 19507 >SEQ10189 Length=3370 Score = 165 bits (182), Expect = 1e-34 Identities = 156/199 (78%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405 ||||||| |||| | ||| | ||| |||||||| ||||||||||| |||| ||| | Sbjct 2991 TGGCCAGCTCGCTGGGCAGCAGCAGCCGCACGGCCGTCTGGATCTCCCGCGACGTGATGG 2932 Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465 | ||||||||| |||||||||| || |||||| | ||||||| |||| |||| Sbjct 2931 TCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCGGCGATGCGCTCGAAGATGT 2872 Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525 ||||||| ||||||||||||| ||| | |||| ||||||||| ||||||||||| Sbjct 2871 CGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCA 2812 Query 1254526 CCTGCTTGAGCACCTTGTA 1254544 ||||||| ||||||||||| Sbjct 2811 CCTGCTTCAGCACCTTGTA 2793 >SEQ29186 Length=1132 Score = 161 bits (178), Expect = 1e-33 Identities = 157/202 (78%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||| ||| |||||| ||| | ||| |||||||| ||||||||||| |||| || Sbjct 955 GCTTGGACAGCTCGCCGGGCAGCAGCAGCCGCACGGCCGTCTGGATCTCCCGCGACGTGA 896 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || |||||| | | ||||| |||| | Sbjct 895 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCAACGCCTCGCCGGCTATGCGCTCGAAGA 836 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| ||||||||| |||||||| Sbjct 835 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 776 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 775 GCACCTGCTTCAGCACCTTGTA 754 >seq1637 Length=20838 Score = 161 bits (178), Expect = 1e-33 Identities = 157/202 (78%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||| | ||| | ||| |||||||| ||||||||||| |||| || Sbjct 5453 GCTTGGCCAGCTCGCTGGGCAGCAGCAGCCGCACGGCCGTCTGGATCTCCCGCGACGTGA 5394 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || |||| | | ||||||| |||| | Sbjct 5393 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTTGCCGGCGATGCGCTCGAAGA 5334 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| ||||||||| |||||||| Sbjct 5333 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGAAGAGATGCCCGTGTCGGGGT 5274 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 5273 GCACCTGCTTCAGCACCTTGTA 5252 >seq255 Length=1113340 Score = 156 bits (172), Expect = 5e-32 Identities = 157/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| || |||||||| |||| | || Sbjct 455997 GCTTGGCCAGCTCACCGGGCAGCAGCAGGCGCACGGCTGTTTGGATCTCCCGCGAGGTGA 455938 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||||| |||| ||||| || |||||| ||||||| |||| | Sbjct 455937 TGGTGGAACGCTTGTTGTAGTGTGCCAGGCGCGAGGCCTCACCCGCGATGCGCTCGAAGA 455878 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||||||| |||||||||| ||| | |||| ||||||||| |||||||| Sbjct 455877 TGTCGTTGACAAAGGAGTTCATGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 455818 Query 1254523 GCACCTGCTTGAGCACCTTGTAGA 1254546 | ||||| || ||||||||||||| Sbjct 455817 GGACCTGTTTCAGCACCTTGTAGA 455794 >seq127 Length=1740037 Score = 91.5 bits (100), Expect = 2e-12 Identities = 135/189 (71%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || ||| | || |||||||| ||||| | ||| || || || Sbjct 1441248 GCTTGGCCAGCTCTCCAGGCAGCAGGAGCCGCACGGCTGTCTGCACCTCTCGACTGGTGA 1441307 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCG-GTGCCGATGCGGTCGATC 1254461 | || | | | ||| | |||| ||| || |||||| ||||| | || || | Sbjct 1441308 TGGTTGAGTGGTGGTTGTACTGCGTCAGGCGCGAGGCCTCCAGTGCC-AGCCGCTCAAAG 1441366 Query 1254462 ATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGG 1254521 ||||| ||||||||||||||||||| ||| | |||| |||||| |||| ||| ||| Sbjct 1441367 ATGTCATTGACAAACGAGTTCATGATGCTCATGGCCTTGGAGGAGATACCCATGTCAGGG 1441426 Query 1254522 TGCACCTGC 1254530 ||||||||| Sbjct 1441427 TGCACCTGC 1441435 >seq4704 Length=6983 Score = 86.0 bits (94), Expect = 8e-11 Identities = 121/169 (72%), Gaps = 6/169 (4%) Strand=Plus/Plus Query 507724 CGTCACGGGCACCTACAACGCCGACTTTGACGGCGACGAGATGAACCTGCACGTGCCCCA 507783 ||| ||| | | |||||||| ||||||||||| |||||||||||||| ||| |||| || Sbjct 2605 CGTGACGACCCCGTACAACGCGGACTTTGACGGGGACGAGATGAACCTTCACCTGCCGCA 2664 Query 507784 GTCCGAGACGGCGCGCGCCGAGGT---GACGCACACCATGAGCGTGTCGCTCAAGACCGT 507840 |||| | | |||| || ||| | | || ||||| ||| ||| || || ||| Sbjct 2665 GTCCCTGGAGACGCGGGCGGAGATCCAGGAGCTGGCCATG---GTGCCGCGCATGATCGT 2721 Query 507841 GTCGCCGCAGGCCAACAAGCCCATCATCGGCCTGGTCATGGACGCCCTC 507889 | |||||| ||||| |||| |||| ||| | || |||| | ||| Sbjct 2722 CACCCCGCAGTCCAACCGGCCCGTCATGGGCATCGTGCAGGACACGCTC 2770 >seq2286 Length=12366 Score = 86.0 bits (94), Expect = 8e-11 Identities = 121/169 (72%), Gaps = 6/169 (4%) Strand=Plus/Minus Query 507724 CGTCACGGGCACCTACAACGCCGACTTTGACGGCGACGAGATGAACCTGCACGTGCCCCA 507783 ||| ||| | | |||||||| ||||||||||| |||||||||||||| ||| |||| || Sbjct 5395 CGTGACGACCCCGTACAACGCGGACTTTGACGGGGACGAGATGAACCTTCACCTGCCGCA 5336 Query 507784 GTCCGAGACGGCGCGCGCCGAGGT---GACGCACACCATGAGCGTGTCGCTCAAGACCGT 507840 |||| | | |||| || ||| | | || ||||| ||| ||| || || ||| Sbjct 5335 GTCCCTGGAGACGCGGGCGGAGATCCAGGAGCTGGCCATG---GTGCCGCGCATGATCGT 5279 Query 507841 GTCGCCGCAGGCCAACAAGCCCATCATCGGCCTGGTCATGGACGCCCTC 507889 | |||||| ||||| |||| |||| ||| | || |||| | ||| Sbjct 5278 CACCCCGCAGTCCAACCGGCCCGTCATGGGCATCGTGCAGGACACGCTC 5230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6104324217243734