Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Callipepla_20squamata_20[genbank_20GCA_5F002218305.1_202017-07-13] 34,302 sequences; 1,045,281,893 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq371 196 1e-44 seq82 152 2e-31 seq384 134 4e-26 seq448 105 2e-17 seq44 100 9e-16 >seq371 Length=876940 Score = 196 bits (216), Expect = 1e-44 Identities = 942/1479 (64%), Gaps = 23/1479 (2%) Strand=Plus/Minus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 || || || |||||| | || || || |||||||| || | ||| | || | | Sbjct 728355 GCCATCGGCATCGATCTGGGCACCACGTATTCTTGCGTGGGTGTCTTCCAGCACGGCAAA 728296 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || || || || || || || || ||| | || ||||| || || || || ||| Sbjct 728295 GTGGAGATCATCGCCAACGACCAGGGAAACCGCACCACGCCCAGCTATGTGGCTTTCACC 728236 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || ||||| | ||||| ||| |||| || || |||| || || || | || Sbjct 728235 GATACGGAGCGCCTCATTGGGGATGCTGCCAAGAACCAAGTGGCGATGAACCCCACCAAC 728176 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCT 349438 || | || ||||| ||||| || || || | | | | |||| | || || Sbjct 728175 ACCATCTTCGATGCCAAGCGTCTCATCGGCCGCAAGTATGATGACCCCACGGTGCAGTCG 728116 Query 349439 GATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAG 349498 || | || |||| || || || || || || |||| || || | | | Sbjct 728115 GACATGAAGCATTGGCCCTTCCGCGTAGTG---AACGAGGGTGGCAAGCCCAAGGTGCAA 728059 Query 349499 GTTGAATATAAAGGTGA-ACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTT 349557 || || || || || || | || || | ||| || ||||| || || ||||| | Sbjct 728058 GTGGAGTACAAGGGCGAGATGAAGACCTTCTTT-CCAGAAGAGATCAGCTCCATGGTGCT 728000 Query 349558 AGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGAT-GCTGTTA 349616 || |||||||| || ||||| || ||| | || ||| || | || ||||||| Sbjct 727999 TACCAAGATGAAGGAGATCGCTGAGGCTTATCTGGG-GAAGAAGGTGCAGAACGCTGTTA 727941 Query 349617 TTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCA 349676 | || || || || || || ||||| ||||||| || || ||||||||||||| || Sbjct 727940 TCACAGTGCCTGCTTACTTCAATGACTCCCAGCGCCAGGCCACCAAAGATGCTGGCACCA 727881 Query 349677 TTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATG 349736 | | || | ||||| | | || || || || ||||| || || || ||||| |||| Sbjct 727880 TCACTGGCCTTAATGTGATGCGTATTATCAACGAGCCCACAGCAGCTGCTATTGCCTATG 727821 Query 349737 GGCTTGATAAAATGAGTGACCA------AGaaaaaaaTATTCTTATTTTTGATTTAGGTG 349790 | | || || | || || ||| || ||| | || || ||||| || || | Sbjct 727820 GCTTGGACAAGAAAGGTACCCGGGCTGGAGAGAAGAATGTGCTCATCTTTGACTTGGGAG 727761 Query 349791 GTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAA 349850 | || |||||||||||||| | || || |||| || || || ||||| || || | | Sbjct 727760 GGGGCACTTTTGATGTATCCATCCTTACCATTGAGGATGGCATCTTTGAGGTGAAGTCTA 727701 Query 349851 CTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTG 349910 | ||||| || || || || ||||| || || ||||| || ||| | || ||||||| Sbjct 727700 CGGCTGGGGACACCCACCTGGGTGGGGAGGACTTTGACAACCGTATGGTGAACCATTTTG 727641 Query 349911 TTAAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGCGT 349969 | |||| || |||||| |||| || ||| |||| | ||| ||||| || | Sbjct 727640 TGGAAGAGTTCAAGCGT-AAGCACAAGCGTGACATTGCTGGCAATAAGCGAGCAGTGAGG 727582 Query 349970 CGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTC-CTTATCATCTACTACCCAAACCTC 350028 || || | || || || || | || || || | || | | ||| | || ||| || Sbjct 727581 CGGCTGCGCACAGCTTGCGAGAGGGCGAAACGCACTCTGAGC-TCTTCCACACAAGCCAG 727523 Query 350029 TATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCG 350088 ||||| ||||| || || || |||| || |||| | ||||| || ||||| || Sbjct 727522 CATTGAGATTGACTCCCTCTTCGAGGGCATTGACTTCTACACCTCTATCACTCGTGCCCG 727463 Query 350089 GTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATT 350148 ||||| || | | || ||||| | | || |||| || ||||| || | | Sbjct 727462 CTTTGAGGAGCTCAATGCCGACCTTTTCCGTGGTACTCTGGAGCCAGTGGAGAAGGCCCT 727403 Query 350149 AAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTAC 350208 ||||| || | ||| ||||| | || | || | || || || || || Sbjct 727402 GCGTGATGCCAAGCTTGACAAGGGCCAGATCCAGGAGATCGTGCTTGTGGGGGGCTCCAC 727343 Query 350209 ACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAAC-CTTCTA 350267 ||||| || || | || |||| || || || || ||||||||||| | | | | Sbjct 727342 TCGTATCCCTAAGATCCAGAAGTTGCTTCAGGACTTCTTCAATGGCAAAGAGCTCAACAA 727283 Query 350268 GATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTAT-TTTA 350326 || | || ||||||||||| |||||||| || || ||||| || || || |||| ||| Sbjct 727282 GAGC-ATCAATCCAGATGAGGCTGTTGCTTACGGCGCTGCGGTGCAAGCGGCTATCCTTA 727224 Query 350327 TCTGGAAATAAGAGTTCTAAAATTGATGATCTATTACTACTAGATGTAACTCCACTTTCG 350386 | ||| | ||| | || | | ||||| | || | ||||| || || || || Sbjct 727223 T-GGGAGACAAGTCTGAGAACGTGCAAGATCTGCTCCTGTTGGATGTCACCCCTCTGTCC 727165 Query 350387 CTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTA 350446 || || | || || | || | || ||||| | ||| || | || | || | Sbjct 727164 CTGGGCATTGAGACGGCAGGCGGTGTGATGACAGCTCTCATCAAGCGTAACACCACGATT 727105 Query 350447 CCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAG-CCAGCGGTAACAAT 350505 || || ||| | | || || || | || | |||| || ||| |||| || | Sbjct 727104 CCCACCAAACAAACGCAGACCTTCACCACCTACTCAGACAACCAGAGCAGC-GTCCTCGT 727046 Query 350506 TCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTAC 350565 || || | ||||||||| | ||| || || || || || || || | ||| Sbjct 727045 CCAGGTGTATGAAGGTGAGAGGGCTATGACGAAGGACAACAACTTGCTGGGCAAGTTTGA 726986 Query 350566 CCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATAT 350625 ||||| | || || ||| || | || || ||||||||||| ||| |||| || || Sbjct 726985 CCTAACGGGCATCCCCCCAGCACCCCGTGGGGTCCCTCAGATTGAGGTCACTTTTGACAT 726926 Query 350626 TGATTCAAATGGTATTTTAAATGTTACCGCAGTTGAAAA 350664 ||| | |||||||| | ||||| | ||| || || || Sbjct 726925 AGATGCGAATGGTATCCTGAATGTCAGCGCTGTGGACAA 726887 >seq82 Length=2126464 Score = 152 bits (168), Expect = 2e-31 Identities = 363/541 (67%), Gaps = 12/541 (2%) Strand=Plus/Minus Query 349770 TTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGG 349829 ||||||| ||||| | || ||||| || |||||||| || | || || ||||||| | Sbjct 1120739 TTCTTATATTTGACCTCGGAGGTGGCACCTTTGATGTGTCGATTCTGACGATTGAAGATG 1120680 Query 349830 GAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATA 349889 | || ||||| || ||| | || || ||||| || ||| | ||||||||||||||||| | Sbjct 1120679 GCATCTTTGAGGTGAAATCCACCGCGGGTGACACTCATTTGGGTGGAGAAGATTTTGACA 1120620 Query 349890 ATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGA 349948 | || | || || || | || || ||||| ||||| || | || || | Sbjct 1120619 ACCGCATGGTCAACCACTTCATCGCTGAGTTCAAGCG-CAAGCACAAGAAGGACATCAGT 1120561 Query 349949 GATAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTA 350008 || || |||||| | |||||||| | |||||||| || ||||| |||||| || | Sbjct 1120560 GAGAACAAGAGAGCAGTTCGTCGCCTTCGTACTGCGTGCGAGCGTGCGAAGCGTACCCTG 1120501 Query 350009 TCATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTT 350068 ||||| | || ||| || ||||||||| |||||||| ||| |||| || |||| Sbjct 1120500 TCATCCAGCACTCAAGCCAGTATTGAAATCGATTCTCTCTATGAGGGCATTGACTTCTAC 1120441 Query 350069 TCATCTATTACACGTGCTCGGTTTGAAGAATTATGTATG--GATCTTTTTAGAGCAACAA 350126 | || || || | ||||| || || || || | | || || || | | || Sbjct 1120440 ACGTCGATCACCAGAGCTCGCTTCGAGGA--GCTGAACGCCGACCTGTTCCGTGGCACCC 1120383 Query 350127 TGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAG 350186 ||||||||||||| || | | ||||| || || ||| ||||| | || Sbjct 1120382 TGGATCCTGTGGAGAAGGCCCTGCGGGATGCCAAGCTGGACAAGTCACAGATCCACGACA 1120323 Query 350187 TAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTT 350246 | || | ||||| || ||||| || || || || | || || | || || || | Sbjct 1120322 TCGTGCTGGTTGGGGGGTCTACCCGCATCCCCAAGATCCAGAAGCTGCTGCAGGACTTCT 1120263 Query 350247 TTAATGGCAAAGAACCTT---CTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTG 350303 | |||||||| || || | ||| | || ||||| |||||||| || || || |||| Sbjct 1120262 TCAATGGCAAGGA--GTTGAACAAGAGC-ATCAATCCTGATGAAGCCGTAGCTTACGGTG 1120206 Query 350304 C 350304 | Sbjct 1120205 C 1120205 Score = 107 bits (118), Expect = 6e-18 Identities = 113/149 (76%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 349598 ACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCA 349657 || || ||| ||||||| | |||||||||||||||||||| || ||||||| || Sbjct 1120987 ACTGTCACTAATGCTGTAGTCACTGTACCAGCCTATTTTAACGACTCCCAGCGGCAGGCC 1120928 Query 349658 ACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACT 349717 |||||||||||||| | |||||| ||| | ||||| || | || || || || || || Sbjct 1120927 ACAAAAGATGCTGGAACCATTGCAGGGCTGAATGTACTGCGGATTATCAACGAGCCAACA 1120868 Query 349718 GCTGCAGCAATTGCATATGGGCTTGATAA 349746 ||||| || || || ||||| || || || Sbjct 1120867 GCTGCTGCTATAGCCTATGGTCTGGACAA 1120839 Score = 86.0 bits (94), Expect = 2e-11 Identities = 191/287 (67%), Gaps = 0/287 (0%) Strand=Plus/Plus Query 183504 AAGTCAATACCATTATATAAGGAATCAATTTCAATCGATGTTTGTGTAGATGATGATAAT 183563 |||||||| || | ||| | ||||| |||||||| | ||| || ||||| | Sbjct 1120445 AAGTCAATGCCCTCATAGAGAGAATCGATTTCAATACTGGCTTGAGTGCTGGATGACAGG 1120504 Query 183564 GTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTCGACGTAATGATCTTGGATTATCTGTA 183623 || | || || || || || || || | || ||||| | || ||| || || | Sbjct 1120505 GTACGCTTCGCACGCTCGCACGCAGTACGAAGGCGACGAACTGCTCTCTTGTTCTCACTG 1120564 Query 183624 ATATCTTGTTTATGTTTTCTTTTAAATTCAGTAATAAAATGTTGAAGTAATCTTGTATCA 183683 || || | || || || | || || |||| || || || | | | | | ||| Sbjct 1120565 ATGTCCTTCTTGTGCTTGCGCTTGAACTCAGCGATGAAGTGGTTGACCATGCGGTTGTCA 1120624 Query 183684 AAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCCGTCT 183743 |||||||| ||||| ||||| || || || || || | ||| || ||||| || || ||| Sbjct 1120625 AAATCTTCTCCACCCAAATGAGTGTCACCCGCGGTGGATTTCACCTCAAAGATGCCATCT 1120684 Query 183744 TCAATATTTAAAATTGATACATCAAATGTACCACCACCCAAATCAAA 183790 ||||| | | ||| || |||||||| || ||||| || | ||||| Sbjct 1120685 TCAATCGTCAGAATCGACACATCAAAGGTGCCACCTCCGAGGTCAAA 1120731 >seq384 Length=852418 Score = 134 bits (148), Expect = 4e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || || || || || || ||||| || || || || || ||||| | || ||||||||| Sbjct 85781 AGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 85840 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || ||||| ||||| || | |||||||| |||||||| |||||||| || Sbjct 85841 TCCAGCTGCTTACCAGCGAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCTTTGTCT 85900 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || || || || || || ||||| | ||| || ||||||||||| || | ||| Sbjct 85901 TGGATCTTGGCCTTCACGTTTTCAATGGTGTCACTGGGCTCAACTTCAAGGGTGATGGTC 85960 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || || || || || |||||||| Sbjct 85961 TTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 85992 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || || || || || || || ||||| || || || || || || | || ||||| ||| Sbjct 86009 AGCACCAGGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCGTCT 86068 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || ||||||||||| || | |||||||| |||||||| |||||||| || Sbjct 86069 TCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCTTTGTCT 86128 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || || || || ||||| || || | ||| || || || ||||| || | |||| Sbjct 86129 TGGATCTTGGCCTTCACATTCTCTATGGTGTCACTGGGCTCGACCTCAAGAGTGATTGTC 86188 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || | ||||| || || |||||||| Sbjct 86189 TTGCCAGTCAAGGTTTTCACGAAGATCTGCAT 86220 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || || || || || || ||||| || || || || || || || | || ||||||||| Sbjct 86237 AGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCT 86296 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || ||||| ||||| || | |||||||| |||||||| |||||||| || Sbjct 86297 TCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCTTTGTCT 86356 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || || || ||||| || ||||| | ||| || || || || || || | ||| Sbjct 86357 TGGATCTTGGCCTTTACGTTTTCAATGGTGTCACTGGGCTCGACCTCGAGCGTGATGGTC 86416 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || || || ||||| |||||||| Sbjct 86417 TTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 86448 >seq448 Length=747048 Score = 105 bits (116), Expect = 2e-17 Identities = 154/214 (72%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || || ||||| || || ||||| || || || || || || || | || ||||||||| Sbjct 684095 AGGACGAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCT 684036 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || |||||||| || || | |||||||| || || || ||||| || ||| Sbjct 684035 TCCAGCTGCTTGCCAGCAAAAATCAGCCTCTGCTGATCGGGGGGGATGCCTTCCTTGTCC 683976 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGG--TTCAACTTCAAGTGTAACTG 140703 || || || || || || || || || | || | ||| | || || |||| || | | Sbjct 683975 TGGATCTTGGCCTTGACGTTCTCGATGGTGTC-GCTGGGCTCCACCTCCAAG-GTGATGG 683918 Query 140704 TCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||| ||||| || || || || || |||||||| Sbjct 683917 TCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 683884 Score = 95.1 bits (104), Expect = 4e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || || || || || || ||||| || || || || || || || | || ||||||||| Sbjct 684793 AGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCT 684734 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || |||||||| || || | |||||||| || || || ||||| || ||| Sbjct 684733 TCCAGCTGCTTGCCAGCAAAAATCAGCCTCTGCTGATCGGGGGGGATGCCTTCCTTGTCC 684674 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || || || || || || || || | |||| || || || || | || | || Sbjct 684673 TGGATCTTGGCCTTGACGTTCTCGATGGTATCACTGGGCTCCACCTCCAAGGTGATGGTT 684614 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || | || || || || |||||||| Sbjct 684613 TTACCAGTCAAGGTCTTCACGAAGATCTGCAT 684582 >seq44 Length=2569273 Score = 100 bits (110), Expect = 9e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 350177 ATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTA 350236 |||||||| | ||| | ||||| |||||||| || || || ||| | || || | | Sbjct 806326 ATTGATGAGATTGTTCTTGTTGGAGGTTCTACTCGCATCCCCAAAATACAGCAACTTGTT 806385 Query 350237 TCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCA 350296 |||||||| |||||||| || |||||| | |||||||| ||||| ||||| || Sbjct 806386 AAAGAGTTTTTCAATGGCAAGGAGCCTTCTCGTGGCATTAATCCGGATGAGGCTGTCGCC 806445 Query 350297 TATGGTGCTGCTGTTCAGGC 350316 |||||||| ||||||||||| Sbjct 806446 TATGGTGCAGCTGTTCAGGC 806465 Score = 98.7 bits (108), Expect = 3e-15 Identities = 126/173 (73%), Gaps = 3/173 (2%) Strand=Plus/Plus Query 349715 ACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTT 349774 ||||| || || ||||| |||||| | || || ||| || || || || || ||| Sbjct 805548 ACTGCAGCTGCCATTGCTTATGGGTTGGACAA---GAGAGAGGGTGAGAAGAACATCCTT 805604 Query 349775 ATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATT 349834 | ||||| | || ||||| ||||||||||| || || || ||| |||| | ||| | Sbjct 805605 GTGTTTGACCTGGGCGGTGGAACTTTTGATGTCTCCCTTCTGACAATTGACAATGGAGTC 805664 Query 349835 TTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGA 349887 ||||||||| || || |||||| ||||| || ||||||||||| ||||| Sbjct 805665 TTTGAAGTTGTGGCTACCAATGGTGACACACACCTGGGTGGAGAAGACTTTGA 805717 Score = 96.9 bits (106), Expect = 1e-14 Identities = 139/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 183250 CAGCTTGAACAGCTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGATAATT 183309 |||| ||||||||||||||||| || ||||| ||||| || ||||| |||||| | Sbjct 806467 CAGCCTGAACAGCTGCACCATAGGCGACAGCCTCATCCGGATTAATGCCACGAGAAGGCT 806408 Query 183310 CTTTGCCATTAAAAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCAC 183369 | |||||||| ||||| ||| || | ||| || ||||| || || | ||| ||||| | Sbjct 806407 CCTTGCCATTGAAAAACTCTTTAACAAGTTGCTGTATTTTGGGGATGCGAGTAGAACCTC 806348 Query 183370 CGACTAATACTACTTCATCGATATTACTTTTACTAATTTGTGAATCTTTTAAAACTTTTT 183429 | || | || | ||||| |||| | || | | | || |||| |||||||| | Sbjct 806347 CAACAAGAACAATCTCATCAATATCAGACTTCTTTAGGTCAGAGTCTTCCAAAACTTTCT 806288 Query 183430 CAACAGGGTCCATAGT 183445 ||| || | ||| || Sbjct 806287 GAACGGGCTTCATTGT 806272 Score = 91.5 bits (100), Expect = 4e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 349601 GTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACA 349660 || ||| |||||||| ||||||| ||||| || || |||||||| |||||| || ||| Sbjct 805346 GTTACTCATGCTGTTGTTACTGTGCCAGCTTACTTCAATGATGCTCAGCGTCAGGCCACA 805405 Query 349661 AAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACC 349713 ||||||||||||| ||||| ||||| || || | | || ||||| || || Sbjct 805406 AAAGATGCTGGCACTATTGCTGGGTTGAACGTGATGCGCATTATTAACGAGCC 805458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1514588454214506