Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calypte_20anna_20[refseq_20GCF_5F000699085.1_202014-06-06] 54,736 sequences; 1,105,676,412 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq2435 105 5e-18 >seq2435 Length=9698745 Score = 105 bits (116), Expect = 5e-18 Identities = 129/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 18960 GATATCCCCTTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAAC 19019 ||||| || | |||| | |||||||| ||| | | || ||||| || ||| | | Sbjct 8901659 GATATTTCCCTGATGGCTTTGCCTCCATGCCACGCCCTTTGCCAGTTCTATGTTCTAGAT 8901718 Query 19020 GGTGAATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTC 19079 |||||||| || |||||| | || ||||| || || |||||||| || || || || ||| Sbjct 8901719 GGTGAATTGTCTTGCCAACTCTATCAGAGGTCTGGAGATATGGGACTGGGAGTGCCTTTC 8901778 Query 19080 AACATTGCTGGATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAA 19135 |||||||| | ||| |||| || || ||||| | || ||||| ||||| || || Sbjct 8901779 AACATTGCCAGCTATTCACTGCTCACATACATGATTGCCCATGTCACAGGGCTAAA 8901834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399237492879120