Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calypte_20anna_20[refseq_20GCF_5F000699085.1_202014-06-06] 54,736 sequences; 1,105,676,412 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq1213 105 5e-18 seq2435 84.2 2e-11 >seq1213 Length=7152351 Score = 105 bits (116), Expect = 5e-18 Identities = 84/101 (83%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 4294 AGTTCCTTGCTGAGAACAACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGGAATT 4353 || ||| |||| || || | |||||||||| ||||||||||||| |||||||||||||| Sbjct 6676340 AGCTCCCTGCTTAGCACTATATTAATTCTGTCTTTTAAAGGCCGATTCTTCTCAGGAATG 6676281 Query 4354 GAGAACCAAGTCTTTTTACCCATAATCACTAAATTCTGTTT 4394 |||||||| || ||| | ||||| |||| | ||||||||| Sbjct 6676280 GAGAACCAGGTTTTTCTGCCCATTATCAGTGCATTCTGTTT 6676240 >seq2435 Length=9698745 Score = 84.2 bits (92), Expect = 2e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 102033 CTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTT 102092 |||| ||||||||||| || ||||||||||| || ||||| || ||||| | || || | Sbjct 8898877 CTTTGTATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGTCCTAAGTCCCCCT 8898818 Query 102093 CATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAA 102152 | |||||| ||||| | ||||| | || | |||||||| |||||||||| Sbjct 8898817 CCTCTCTGGTGCTGAAACCCTGCTTATCCAGGAACTCACGTGATCCATTGGCATCCCAAA 8898758 Query 102153 TGTGCACGCCAGCTGCTGATAGCTCTTTG 102181 | | ||| || ||| || || |||||| Sbjct 8898757 TCTTCACACCCTTTGCAGAGAGTTCTTTG 8898729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361010211130736