Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calypte_20anna_20[refseq_20GCF_5F000699085.1_202014-06-06]
54,736 sequences; 1,105,676,412 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq1213 105 5e-18
seq2435 84.2 2e-11
>seq1213
Length=7152351
Score = 105 bits (116), Expect = 5e-18
Identities = 84/101 (83%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 4294 AGTTCCTTGCTGAGAACAACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGGAATT 4353
|| ||| |||| || || | |||||||||| ||||||||||||| ||||||||||||||
Sbjct 6676340 AGCTCCCTGCTTAGCACTATATTAATTCTGTCTTTTAAAGGCCGATTCTTCTCAGGAATG 6676281
Query 4354 GAGAACCAAGTCTTTTTACCCATAATCACTAAATTCTGTTT 4394
|||||||| || ||| | ||||| |||| | |||||||||
Sbjct 6676280 GAGAACCAGGTTTTTCTGCCCATTATCAGTGCATTCTGTTT 6676240
>seq2435
Length=9698745
Score = 84.2 bits (92), Expect = 2e-11
Identities = 108/149 (72%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 102033 CTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTT 102092
|||| ||||||||||| || ||||||||||| || ||||| || ||||| | || || |
Sbjct 8898877 CTTTGTATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGTCCTAAGTCCCCCT 8898818
Query 102093 CATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAA 102152
| |||||| ||||| | ||||| | || | |||||||| ||||||||||
Sbjct 8898817 CCTCTCTGGTGCTGAAACCCTGCTTATCCAGGAACTCACGTGATCCATTGGCATCCCAAA 8898758
Query 102153 TGTGCACGCCAGCTGCTGATAGCTCTTTG 102181
| | ||| || ||| || || ||||||
Sbjct 8898757 TCTTCACACCCTTTGCAGAGAGTTCTTTG 8898729
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361010211130736
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |