Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calypte_20anna_20[refseq_20GCF_5F000699085.1_202014-06-06] 54,736 sequences; 1,105,676,412 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq2435 98.7 7e-16 >seq2435 Length=9698745 Score = 98.7 bits (108), Expect = 7e-16 Identities = 111/148 (75%), Gaps = 8/148 (5%) Strand=Plus/Minus Query 97402 TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461 |||||||||||||| |||||||| ||||| |||||||| ||||| | ||| || || ||| Sbjct 8898872 TATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGTCCTAAGTCCCCCTCCTCT 8898813 Query 97462 CTATCACAGAAACCAAGCTTATCTAAATAGGACCT----AGATCCATTTGCATCCCAAAT 97517 || | |||||| ||||||| |||| || |||||||| ||||||||||| Sbjct 8898812 CTGGTGCTGAAACCCTGCTTATC----CAGGAACTCACGTGATCCATTGGCATCCCAAAT 8898757 Query 97518 GTGCACACCAGATGCTGCAAGCTCTTTG 97545 | |||||| ||| | || |||||| Sbjct 8898756 CTTCACACCCTTTGCAGAGAGTTCTTTG 8898729 Score = 86.0 bits (94), Expect = 4e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176 ||||||||||| ||||| | || | || |||||||| |||||||| |||||||| || Sbjct 8901825 GTGACATGGGCAATCATGTATGTGAGCAGTGAATAGCTGGCAATGTTGAAAGGCACTCCC 8901766 Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAA 97236 ||||||||||| | || || ||||| | || || || | | ||||| ||||| Sbjct 8901765 AGTCCCATATCTCCAGACCTCTGATAGAGTTGGCAAGACAATTCACCATCTAGAACATAG 8901706 Query 97237 AACTGACTCAATACATGACAGGGGGGCAACGCCAT 97271 ||||| | | | || || || ||||| ||||| Sbjct 8901705 AACTGGCAAAGGGCGTGGCATGGAGGCAAAGCCAT 8901671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346552662127520