Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calypte_20anna_20[refseq_20GCF_5F000699085.1_202014-06-06]
54,736 sequences; 1,105,676,412 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq325 129 6e-25
seq3828 105 6e-18
>seq325
Length=5823465
Score = 129 bits (142), Expect = 6e-25
Identities = 110/136 (81%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 14226 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 14285
||||||||||||| || ||||| || ||||| || | ||| ||||||||||||| ||| |
Sbjct 5212132 CCTCATCTCTACTGATGAGTTCATTAGAAAAAGTCAGTCCAGGCATCAATCCTCTTTTCT 5212191
Query 14286 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14345
| | |||||| |||| || || || || |||||||| ||||| || ||||| ||||| |
Sbjct 5212192 TCAGCCAAAAAATTGATGCAAAAGAGCCAGAAAAGAAGATTCCTTCCACTGCTGCAAAAG 5212251
Query 14346 CTATTAATCGTTCTCC 14361
||| || |||||||||
Sbjct 5212252 CTACTACTCGTTCTCC 5212267
Score = 89.7 bits (98), Expect = 5e-13
Identities = 95/124 (77%), Gaps = 1/124 (1%)
Strand=Plus/Plus
Query 14457 TCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGT 14516
||||||||| | | ||||| || |||||||| | || |||||||| || |||||||
Sbjct 5214160 TCTCTTTAGGATCTTTGATGTAGGTGTCAATAAGAAGACTGTACATTTCTGAATGTATGT 5214219
Query 14517 TTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTC-TGAG 14575
||||||| || ||||| || ||||| ||||| | ||||||| |||||| || |||
Sbjct 5214220 TTTCCATGGCAATCTGGAAGCCATAGAAACAACGCGCTTCTGTGACTTGTACTTCTTGAC 5214279
Query 14576 TAAA 14579
||||
Sbjct 5214280 TAAA 5214283
>seq3828
Length=4044606
Score = 105 bits (116), Expect = 6e-18
Identities = 96/121 (79%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 14226 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 14285
|||||||||| ||||||||||| || || || || | ||| ||||||| |||| || |
Sbjct 1121704 CCTCATCTCTGCTAATAAGTTCATTGGAGAAAGTCAGTCCAGGCATCAGGCCTCTCTTCT 1121763
Query 14286 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14345
| ||||||||||| ||||| || || || || ||||| || || ||||| |||||||| |
Sbjct 1121764 TCAACCAAAATATAGCAGCAAAGGAACCTGAGAAGAAGATGCCTTCAACAGCAGCAAAGG 1121823
Query 14346 C 14346
|
Sbjct 1121824 C 1121824
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482015579140480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |