Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calypte_20anna_20[refseq_20GCF_5F000699085.1_202014-06-06] 54,736 sequences; 1,105,676,412 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq797 109 1e-18 seq2435 95.1 3e-14 >seq797 Length=179301 Score = 109 bits (120), Expect = 1e-18 Identities = 116/153 (76%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170 || ||| |||| |||| | ||||||| || || |||| ||||| || || ||||| ||| Sbjct 68123 GCCCAGCAGCTCTGGTATTCCATCATCGAATCCCAGACAGAGACTGGGACTCCCTACATG 68182 Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230 | ||||| ||||| |||||||||||| |||||||||| |||| || || || || Sbjct 68183 CTCTACAAGGATTCCTGCAACCGCAAGAGCAACCAGCAGAACCTGGGCACCATCAAGAGC 68242 Query 364231 AGCAACCTATGTACCGAGATTATTGAATACACC 364263 |||||||| || || || || | || |||||| Sbjct 68243 AGCAACCTCTGCACAGAAATCGTGGAGTACACC 68275 >seq2435 Length=9698745 Score = 95.1 bits (104), Expect = 3e-14 Identities = 123/168 (73%), Gaps = 4/168 (2%) Strand=Plus/Plus Query 111389 TACAAATGCAAATGAACTTGCAGCAAAAAATGTAAAAATTTGGGATGGAAATGGATCACG 111448 ||||||||| || ||||| | ||||| ||| || |||||||||| ||||||||||| Sbjct 8898720 TACAAATGCCAAAGAACTCTCTGCAAAGGGTGTGAAGATTTGGGATGCCAATGGATCACG 8898779 Query 111449 TGACTTTCTAGAT--TCAGTTGGTCTTGTCGACAACGAAGAAGGTGATCTCGGACCAGTT 111506 ||| || || ||| ||| ||| | | || || || || || | ||||||||| Sbjct 8898780 TGAGTTCCTGGATAAGCAG--GGTTTCAGCACCAGAGAGGAGGGGGACTTAGGACCAGTT 8898837 Query 111507 TACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAACCATGCAC 111554 || || || || ||| | |||||||| ||||| |||||| |||||| Sbjct 8898838 TATGGTTTCCAGTGGAGGCACTTTGGAGCAGAATACAAAGATATGCAC 8898885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302439551603552