Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calypte_20anna_20[refseq_20GCF_5F000699085.1_202014-06-06] 54,736 sequences; 1,105,676,412 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq1844 95.1 1e-14 seq324 86.0 5e-12 >seq1844 Length=2686333 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || ||||| || || || || || |||||||| ||| |||| ||| ||||| Sbjct 2460071 ATGCAGATCTTTGTGAAGACCCTGACTGGGAAAACCATCACCCTCGAGGTTGAGCCCAGC 2460130 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| ||| | || ||| || || |||||||||||| | ||| ||| ||| Sbjct 2460131 GACACCATTGAGAACGTGAAAGCCAAGATCCAGGATAAAGAAGGCATTCCCCCTGACCAG 2460190 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || || || || | ||| ||||| || || ||||||| ||| || | || || ||| Sbjct 2460191 CAGAGGCTGATCTTTGCTGGCAAGCAGTTGGAAGATGGGCGCACCCTGTCTGACTACAAC 2460250 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 || || || || || || | ||| | ||| || | || |||| || Sbjct 2460251 ATCCAGAAGGAATCCACCCTCCATCTTGTGCTGCGCCTGAGAGGGGG 2460297 >seq324 Length=3932543 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || ||||| || || | || || || ||||| ||| | || ||| |||| Sbjct 118755 ATGCAGATCTTTGTGAAGACCTTGACAGGCAAGACCATCACCCTGGAGGTTGAGCCCAGT 118814 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| | | | | || ||| || || |||||||||||| | ||| |||||| Sbjct 118815 GACACCATCGAAAATGTCAAAGCCAAGATCCAGGATAAAGAAGGCATTCCCCCAGATCAG 118874 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || || || || | ||| ||||| || | ||||||| ||| || | || || ||| Sbjct 118875 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 118934 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 || || || ||||||||| | || ||||| || | || |||| || Sbjct 118935 ATCCAGAAGGAGTCTACTCTGCACTTGGTGCTGCGTCTGAGAGGTGG 118981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425060255144320