Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calypte_20anna_20[refseq_20GCF_5F000699085.1_202014-06-06] 54,736 sequences; 1,105,676,412 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq25906 86.0 7e-12 seq3828 84.2 3e-11 >seq25906 Length=586 Score = 86.0 bits (94), Expect = 7e-12 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 ||||| ||| | ||||| ||||||| | | || ||||| |||| ||| || || ||||| Sbjct 391 TAGATGTTGCTGGTGTAGGGCTCAATGGATTCGTTGTTGCCCAGGATCTGAGCAGTGGAA 332 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 114033 ||||| |||||||| | || |||||||||||| Sbjct 331 GCTGTTGGCATGGGGGACAGGAGAAGGCTGTT 300 >seq3828 Length=4044606 Score = 84.2 bits (92), Expect = 3e-11 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 126080 ATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATC 126139 || |||||||| ||||| |||||| ||||| || || | |||||||||||| || || Sbjct 1121718 ATAAGTTCATTGGAGAAAGTCAGTCCAGGCATCAGGCCTCTCTTCTTCAACCAAAATATA 1121777 Query 126140 GCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAACGCAA 126188 ||| ||| ||||| ||||||||||| || || ||| || || |||| Sbjct 1121778 GCAGCAAAGGAACCTGAGAAGAAGATGCCTTCAACAGCAGCAAAGGCAA 1121826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596944890666880