Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calypte_20anna_20[refseq_20GCF_5F000699085.1_202014-06-06]
54,736 sequences; 1,105,676,412 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq1844 134 1e-26
seq324 125 7e-24
seq1420 84.2 2e-11
>seq1844
Length=2686333
Score = 134 bits (148), Expect = 1e-26
Identities = 161/216 (75%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| ||||| | || || ||||| | |||||||| || | || ||||||| |||||
Sbjct 2460054 AGCACAAGATGGAGGGTTGACTCTTTCGGGATGTTGTAGTCGGAGAGGGTGCGCCCGTCT 2459995
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||||||||| ||| | || |||| ||||||||| || ||||| ||||| || ||
Sbjct 2459994 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTGTCC 2459935
Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
|| | | || ||||| || ||| | || |||| || || || || | |||| |||
Sbjct 2459934 TGGA-TCTTGGCTTTCACGTTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTTATGGT 2459876
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|||||| |||| || || || || || ||||||||
Sbjct 2459875 CTTGCCAGTCAGGGTCTTCACAAAGATCTGCATTTT 2459840
Score = 131 bits (144), Expect = 2e-25
Identities = 156/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| ||||| | || ||||| || || |||||||| || | || ||||||| |||||
Sbjct 2460738 AGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGCCCGTCT 2460679
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||||||||| ||| | || |||| ||||||||| || ||||| |||||||| ||
Sbjct 2460678 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCC 2460619
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| ||| ||| | || |||| || || || || | || | |||
Sbjct 2460618 TGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTT 2460559
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| || |||| || || || || || |||||
Sbjct 2460558 TTCCCAGTCAGGGTCTTCACAAAGATCTGCAT 2460527
Score = 122 bits (134), Expect = 9e-23
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| ||||| | || || ||||| || |||||||| || | || ||||||| | |||
Sbjct 2460510 AGCACGAGATGCAGGGTTGACTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGCCCATCT 2460451
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||||||||| ||| | || |||| |||||| || || ||||| ||||| || ||
Sbjct 2460450 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCC 2460391
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| ||| ||| | || |||| || || || || | || | |||
Sbjct 2460390 TGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTT 2460331
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||| |||| || || || || || |||||
Sbjct 2460330 TTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 2460299
>seq324
Length=3932543
Score = 125 bits (138), Expect = 7e-24
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| ||||| | || ||||| || || |||||||| || | | ||||||| | |||
Sbjct 119194 AGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 119135
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||||||||| ||| | || |||| |||||||||||| ||||| || || || ||
Sbjct 119134 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCCTCCTTGTCC 119075
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| ||| || | || |||| || || || || | || | ||||
Sbjct 119074 TGGATCTTGGCCTTGACATTTTCGATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTC 119015
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||| ||||| || || || || || |||||
Sbjct 119014 TTGCCTGTCAAGGTCTTGACAAAGATCTGCAT 118983
Score = 118 bits (130), Expect = 1e-21
Identities = 146/200 (73%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || || || |||||||| || | | |||||| | ||||| |||||||||||
Sbjct 118723 GTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCATCTTCCAGCTGCTTGCCA 118664
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | || | || |||||||||||| ||||| || || || || || || || |||
Sbjct 118663 GCAAAGATCAACCTCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTG 118604
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
||| || | || |||| || || ||||| | ||| | ||||||||| |||| ||
Sbjct 118603 ACATTTTCGATGGTGTCACTGGGCTCAACTTCCAGAGTGATGGTCTTGCCTGTCAGGGTC 118544
Query 64427 TTTACGAAAATTTGCATTTT 64446
|| ||||| || ||||||||
Sbjct 118543 TTCACGAAGATCTGCATTTT 118524
Score = 111 bits (122), Expect = 2e-19
Identities = 145/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || || || |||||||| || | | ||||||| | ||||| |||||||||||
Sbjct 118951 GTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCA 118892
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | || |||| |||||| || || ||||| |||||||| || || | | || |||||
Sbjct 118891 GCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCTTTATCCTGGA-TCTTGGCTTT 118833
Query 64367 -ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGT 64425
||| || | || |||| || || || || | || | ||||||||| ||||| ||
Sbjct 118832 GACATTTTCGATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTGCCTGTCAAGGT 118773
Query 64426 TTTTACGAAAATTTGCAT 64443
|| || || || |||||
Sbjct 118772 CTTCACAAAGATCTGCAT 118755
>seq1420
Length=3350139
Score = 84.2 bits (92), Expect = 2e-11
Identities = 72/89 (81%), Gaps = 0/89 (0%)
Strand=Plus/Plus
Query 64254 CTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAA 64313
|||||||||||||||| || | | ||||| | ||||| |||||||| || ||| |||
Sbjct 2047922 CTTTTTGAATGTTGTAGTCAGACAGTGTGCGTCCATCTTCTAGCTGCTTCCCAGCAAAAA 2047981
Query 64314 TGAGCCGCTGCTGGTCGGGAGGAATTCCT 64342
| ||||||||||| || |||||||| |||
Sbjct 2047982 TCAGCCGCTGCTGATCAGGAGGAATGCCT 2048010
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499302943027840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |