Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calypte_20anna_20[refseq_20GCF_5F000699085.1_202014-06-06]
54,736 sequences; 1,105,676,412 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq1844 95.1 9e-15
>seq1844
Length=2686333
Score = 95.1 bits (104), Expect = 9e-15
Identities = 150/214 (70%), Gaps = 1/214 (0%)
Strand=Plus/Minus
Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032
||| ||||| || ||||| | |||||||| ||| ||| | | | ||||||| | ||
Sbjct 2460046 ATGGAGGGTTGACTCTTTCGGGATGTTGTAGTCGGAGAGGGTGCGCCCGTCTTCCAGCTG 2459987
Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092
|||||||| | |||| | ||| ||||| ||||| ||||||||||| || ||
Sbjct 2459986 CTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATCTT 2459927
Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152
| ||| || | || || || || || || || || | ||| ||||| || || ||
Sbjct 2459926 GGCTTTCACGTTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTTATGGTCTTGCCAGT 2459867
Query 15153 CAGAGTTTTTACAAAAATTTGCATATTTGAAATA 15186
||| || || ||||| || ||||| |||||| ||
Sbjct 2459866 CAGGGTCTTCACAAAGATCTGCAT-TTTGAACTA 2459834
Score = 91.5 bits (100), Expect = 1e-13
Identities = 143/205 (70%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032
||| ||||| || ||||| || |||||||| ||| ||| | | | | ||||| | ||
Sbjct 2460502 ATGCAGGGTTGACTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGCCCATCTTCCAGCTG 2460443
Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092
|||||||| | |||| | ||| || || ||||| ||||||||||| || ||
Sbjct 2460442 CTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTT 2460383
Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152
| || ||| | || || || || || || || || | ||| |||||||| || ||
Sbjct 2460382 GGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTTTTGCCAGT 2460323
Query 15153 CAGAGTTTTTACAAAAATTTGCATA 15177
||| || || ||||| || ||||||
Sbjct 2460322 CAGGGTCTTCACAAAGATCTGCATA 2460298
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357153585583760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |