Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calypte_20anna_20[refseq_20GCF_5F000699085.1_202014-06-06] 54,736 sequences; 1,105,676,412 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq1844 93.3 4e-14 >seq1844 Length=2686333 Score = 93.3 bits (102), Expect = 4e-14 Identities = 151/215 (70%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 45128 CAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATC 45187 || ||| ||||| || || |||||||| ||||| || || || | ||| ||| Sbjct 2460283 CAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 2460224 Query 45188 GTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATC 45247 ||||| || || || || | |||| | |||||||| || ||||||||||||||||| Sbjct 2460223 TTCCAACTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCTTTATC 2460164 Query 45248 TTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCG 45306 || || || ||| | || | || | ||||||| | ||| || ||||| || | | Sbjct 2460163 CTGGATCTTGGCTTTCA-CGTTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGG 2460105 Query 45307 TTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 |||| || || || || || ||||| || |||||| Sbjct 2460104 TTTTCCCAGTCAGGGTCTTCACAAAGATCTGCATC 2460070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451693939410560