Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calypte_20anna_20[refseq_20GCF_5F000699085.1_202014-06-06]
54,736 sequences; 1,105,676,412 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq25906 89.7 6e-13
seq797 82.4 9e-11
>seq25906
Length=586
Score = 89.7 bits (98), Expect = 6e-13
Identities = 75/92 (82%), Gaps = 0/92 (0%)
Strand=Plus/Minus
Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962
||||||||| | ||||| ||||||| | | || ||||| |||| ||| || || |||||
Sbjct 391 TAGATGTTGCTGGTGTAGGGCTCAATGGATTCGTTGTTGCCCAGGATCTGAGCAGTGGAA 332
Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 115994
||||| |||||||| | || ||||||||||||
Sbjct 331 GCTGTTGGCATGGGGGACAGGAGAAGGCTGTT 300
>seq797
Length=179301
Score = 82.4 bits (90), Expect = 9e-11
Identities = 99/135 (73%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 116460 CTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCC 116519
||||||||| |||||||| | ||||| || || | || ||||| ||||||||
Sbjct 68287 CTCATCCTTGCTGGTGTACTCCACGATTTCTGTGCAGAGGTTGCTGCTCTTGATGGTGCC 68228
Query 116520 CAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCC 116579
|| ||||| || || ||| ||| || | ||||||||||||||| || || |||||
Sbjct 68227 CAGGTTCTGCTGGTTGCTCTTGCGGTTGCAGGAATCCTTGTAGAGCATGTAGGGAGTCCC 68168
Query 116580 CGTCTCCGTTTGGGA 116594
||||| || |||||
Sbjct 68167 AGTCTCTGTCTGGGA 68153
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613087438373760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |