Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calypte_20anna_20[refseq_20GCF_5F000699085.1_202014-06-06] 54,736 sequences; 1,105,676,412 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq25906 89.7 6e-13 seq797 82.4 9e-11 >seq25906 Length=586 Score = 89.7 bits (98), Expect = 6e-13 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 ||||||||| | ||||| ||||||| | | || ||||| |||| ||| || || ||||| Sbjct 391 TAGATGTTGCTGGTGTAGGGCTCAATGGATTCGTTGTTGCCCAGGATCTGAGCAGTGGAA 332 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 115994 ||||| |||||||| | || |||||||||||| Sbjct 331 GCTGTTGGCATGGGGGACAGGAGAAGGCTGTT 300 >seq797 Length=179301 Score = 82.4 bits (90), Expect = 9e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 116460 CTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCC 116519 ||||||||| |||||||| | ||||| || || | || ||||| |||||||| Sbjct 68287 CTCATCCTTGCTGGTGTACTCCACGATTTCTGTGCAGAGGTTGCTGCTCTTGATGGTGCC 68228 Query 116520 CAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCC 116579 || ||||| || || ||| ||| || | ||||||||||||||| || || ||||| Sbjct 68227 CAGGTTCTGCTGGTTGCTCTTGCGGTTGCAGGAATCCTTGTAGAGCATGTAGGGAGTCCC 68168 Query 116580 CGTCTCCGTTTGGGA 116594 ||||| || ||||| Sbjct 68167 AGTCTCTGTCTGGGA 68153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613087438373760