Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calypte_20anna_20[refseq_20GCF_5F000699085.1_202014-06-06]
54,736 sequences; 1,105,676,412 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq3231 109 2e-18
seq338 95.1 5e-14
>seq3231
Length=6269119
Score = 109 bits (120), Expect = 2e-18
Identities = 397/607 (65%), Gaps = 26/607 (4%)
Strand=Plus/Plus
Query 451898 GAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTT----GTC 451953
|| |||||||| || || || ||||| || || ||||| || ||| | || | | |
Sbjct 5108937 GAGATTGTGCTGGTGGGGGGCTCTACCCGTATCCCTAAGATCCAAAAGCTGCTACAGGAC 5108996
Query 451954 TTCTTATTTTGGAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCATA 452013
||||| | || ||| | || |||||| | || |||||||| |||||||| ||
Sbjct 5108997 TTCTTCAAT----GGCAAAGAGCTCAACAAGAGCATCAACCCTGATGAGGCTGTTGCTTA 5109052
Query 452014 TGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCAGATGA---TGAAAAATTAGGAGA 452070
|||||||| || ||||||||||| || | || ||| | ||| || | ||
Sbjct 5109053 CGGTGCTGCTGTGCAAGCAGCTATACTCATGGG---AGACAAGTCTGAGAATGTGCAGGA 5109109
Query 452071 TATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGAT 452130
| | ||| | | ||||| || ||||| || || || | || ||||| |||||| ||||
Sbjct 5109110 TCTACTGCTGCTGGATGTCACCCCTCTGTCCCTGGGCATCGAGACAGCCGGTGGAGTGAT 5109169
Query 452131 GACTAATTTAATTAAACGAGGAACTTCTATTCCTTGTAAAAAGAGTCAAACATTTAGTAC 452190
|||| | | || || || || | ||||| ||| | | ||| || || | |
Sbjct 5109170 GACTGCTCTCATCAAGCGCAACACCACCATTCCCACCAAACAAACTCAGACCTTCA--CC 5109227
Query 452191 AGCAAGT--GATAACCA-ACCAGGTGTAACTA-TTCAAGTGTTTGAAGGAGAACGTGCAA 452246
| | | | || ||||| | || |||| ||| | || |||| || || || | || |
Sbjct 5109228 ACCTACTCAGACAACCAGAGCA-GTGT-CCTAGTCCAGGTGTACGAGGGTGAGAGGGCTA 5109285
Query 452247 TGACACGAGATAATAATAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCAA 452306
||||| ||||| || ||| || | ||| ||| | ||| || || ||
Sbjct 5109286 TGACAAAGGATAACAACTTACTGGGCAAGTTTGATCTAACGGGCATCCCCCCAGCACCCC 5109345
Query 452307 GGGGAACTCCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGA 452366
| ||| || || || || | || | ||| ||||||| |||||||| || ||||| |
Sbjct 5109346 GTGGAGTCCCCCAGATCGAGGTCACTTTTGACATTGATGCCAATGGTATCCTGAATGTCA 5109405
Query 452367 GTGCAGTTGA-AAAATCATCTGGAAAATCAGAAAAAATTACAATTACTAATGATAAAAAC 452425
|||| || || || | || | || ||| | | || || || || || ||||| ||
Sbjct 5109406 GTGCTGTGGACAAGAGCA-CAGGTAAAGAAAACAAGATCACCATCACCAATGACAAGGGT 5109464
Query 452426 CG-TTTATCTAAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGA 452484
|| ||| | ||||| || ||||| ||||| | ||||||||||| | ||| | ||
Sbjct 5109465 CGCCTTAGC-AAAGATGACATTGACCGGATGGTGCAAGAAGCAGAAAAGTACAAAGCAGA 5109523
Query 452485 TGATGAA 452491
||||||
Sbjct 5109524 GGATGAA 5109530
Score = 100 bits (110), Expect = 1e-15
Identities = 287/436 (66%), Gaps = 9/436 (2%)
Strand=Plus/Plus
Query 451177 TGTAGTAAATCAAAAAGGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAAC 451236
||| || ||| | | || |||||| | | ||||| | || || ||||| | || ||
Sbjct 5108213 TGTGGTGAATGAGAGTGGCAAGCCCAAGGTGCAAGTGGAGTACAAGGGTGAGATGAAGAC 5108272
Query 451237 TTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACA 451296
|| || || || || || ||||| ||||| || |||||||| | || ||
Sbjct 5108273 CTTCTTCCCAGAGGAGATCAGCTCCATGGTCCTTACCAAGATGAAAGAGATTGCTGAGGC 5108332
Query 451297 ATATATTGGTTCTCCAGTTACTGA-TGCAGTAATTACTGTTCCCGCTTATTTCAATGATG 451355
||| | || | | || | | || ||| || || || || || ||||| ||||||||
Sbjct 5108333 TTATCTGGGA-CGCAAGGTGCAGAATGCTGTCATCACAGTGCCTGCTTACTTCAATGACT 5108391
Query 451356 CACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTA 451415
| || || || || || ||||| || || || |||| | ||||| | || ||||
Sbjct 5108392 CTCAGCGCCAGGCCACCAAAGACGCTGGCACCATCACTGGCCTTAATGTGATGCGTATTA 5108451
Query 451416 TTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAA-----AC 451470
| || || || |||||||||||| |||| ||||| || ||| || ||| | | |
Sbjct 5108452 TCAACGAGCCAACAGCAGCTGCTATAGCCTATGG-CTTGGACAA-GAAAGGTACTCGGGC 5108509
Query 451471 AGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACT 451530
| ||| || ||| | | | ||||| || || || || ||| ||| || | ||
Sbjct 5108510 TGGAGAGAAGAATGTGCTCATCTTTGACTTAGGAGGGGGTACTTTCGATGTGTCCATCCT 5108569
Query 451531 TTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGG 451590
| | ||||| ||||| | ||||| || ||| | || |||||| || ||||| || ||
Sbjct 5108570 TACCATTGAGGATGGCATCTTTGAGGTGAAGTCCACAGCTGGTGACACCCATCTGGGTGG 5108629
Query 451591 TGAAGATATTGATAAT 451606
|| || |||| |||
Sbjct 5108630 GGAGGACTTTGACAAT 5108645
>seq338
Length=1383603
Score = 95.1 bits (104), Expect = 5e-14
Identities = 105/140 (75%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372
|||||| |||| ||| | ||||| || || ||||||||||| | || || || || |||
Sbjct 65767 GTTACTAATGCTGTAGTGACTGTGCCAGCCTATTTCAATGACTCCCAGCGTCAGGCTACT 65826
Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432
|||||||||||| ||||| || | || || || |||| || ||||| || |||||
Sbjct 65827 AAAGATGCAGGAACCATTGCAGGGCTCAACGTGCTGAGAATCATCAATGAGCCAACAGCT 65886
Query 451433 GCTGCTCTAGCATATGGACT 451452
||||| | || ||||| ||
Sbjct 65887 GCTGCCATTGCTTATGGTCT 65906
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1974332818807488
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |