Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calypte_20anna_20[refseq_20GCF_5F000699085.1_202014-06-06] 54,736 sequences; 1,105,676,412 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq338 183 4e-41 seq1197 100 4e-16 >seq338 Length=1383603 Score = 183 bits (202), Expect = 4e-41 Identities = 364/539 (68%), Gaps = 0/539 (0%) Strand=Plus/Minus Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAA 7099 || ||||| || || |||||||| || || || | || ||||| ||||| || || || Sbjct 66558 GCACCGTAAGCCACAGCCTCATCAGGATTGATGCTCTTGTTCAGCTCTTTGCCATTGAAG 66499 Query 7100 TAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATT 7159 ||||| | || | ||||| || ||||| || || || || || |||| ||||| Sbjct 66498 AAATCCTGCAGCAACTTCTGAATCTTGGGGATACGAGTAGACCCCCCAACCAGCACGATG 66439 Query 7160 TCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATA 7219 |||| | | || || || | ||| | || || || | || || ||||| |||| | Sbjct 66438 TCATGGATCTGGGACTTGTCCAGCTTGGCATCCCGCAGAGCCTTCTCCACAGGATCCAGA 66379 Query 7220 CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG 7279 |||||| | ||| | ||| || ||||| || || | ||| |||||||| ||| Sbjct 66378 GTGCCACGGAAGAGGTCAGCATTCAGCTCTTCAAAGCGAGCTCTGGTGATGGATGTGTAG 66319 Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339 || |||| || || || | ||||||||||||||| | | || | | || || | Sbjct 66318 AAGTCAATACCCTCATAGAGAGAATCAATTTCAATGCTGGCCTGGGTGCTGGAGGACAGG 66259 Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 || | ||| || ||||| || || || || | || |||| || | | ||| | Sbjct 66258 GTCCTCTTGGCCCGCTCGCAGGCGGTGCGGAGGCGCCGAACAGCTCTCTTGTTCTCACTG 66199 Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCG 7459 || || ||||| || || | || ||||| || |||||| | | || ||| Sbjct 66198 ATGTCCTTCTTGTGCTTCCTCTTGAACTCAGCAATGAAGTGGTTCACCATCCTGTTGTCG 66139 Query 7460 AAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCT 7519 || ||||| ||||||||||| || || ||||| || | ||| || |||||||| || || Sbjct 66138 AAGTCTTCTCCACCCAAGTGAGTGTCACCCGCAGTGGATTTCACCTCAAAGATGCCATCT 66079 Query 7520 TCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT 7578 ||||| | | | || |||||||| || ||||| |||||||| || || || ||||| Sbjct 66078 TCAATTGTCAGGATGGACACATCAAAGGTGCCACCTCCCAGGTCGAAGATCAGAACGTT 66020 >seq1197 Length=5421966 Score = 100 bits (110), Expect = 4e-16 Identities = 130/177 (73%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTC-ATGGCTGTTTGGTTCTT 7995 ||||| || ||||| |||||||| || ||||| | |||||| ||| | | | ||||||| Sbjct 3550163 CCGATGAGCCGCTTGGCATCAAACACGGTGTTCTCGGGGTTGGATGTCAGCT-GGTTCTT 3550105 Query 7996 CGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGT 8055 || ||||||||||| | || || | ||| ||||| ||||| || || || | Sbjct 3550104 GGCGGCGTCCCCGATCAACCGCTCCCCCTCGGGCGTGAACGCCACGTAGGACGGCGTGAT 3550045 Query 8056 TCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGAC 8112 |||||||| |||||||| || || |||||||| ||| | || | ||||||| || Sbjct 3550044 ACGATTCCCCTGGTCGTTGGCGATGATTTCTACCCGGCCATTCTTAAAGACGCCCAC 3549988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634698242138240