Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calypte_20anna_20[refseq_20GCF_5F000699085.1_202014-06-06] 54,736 sequences; 1,105,676,412 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq3766 93.3 5e-14 seq2382 93.3 5e-14 seq765 93.3 5e-14 seq25906 87.8 2e-12 seq797 84.2 3e-11 >seq3766 Length=1248695 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 229379 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 229321 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 238306 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 238248 >seq2382 Length=3960629 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 426006 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 426064 >seq765 Length=2861777 Score = 93.3 bits (102), Expect = 5e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 168430 TTACCACGGAGTGGAAATACCCCATAATGATCTCTACCCACGACGGAGAGACCAGCGACA 168489 || ||||| || |||||||||||||| | |||||||| || || |||||||| |||| Sbjct 896101 TTCCCACGAAGAGGAAATACCCCATATTTGTCTCTACCAACCACTCCGAGACCAGAGACA 896160 Query 168490 GCGAGAGTTTTCGCTGAATCACCCTCTGTCACGATGAGTGTACA 168533 || | ||||| |||||||| ||||| |||| ||| ||||| || Sbjct 896161 GCCAATGTTTTGGCTGAATCTCCCTCAGTCAGGATAAGTGTGCA 896204 >seq25906 Length=586 Score = 87.8 bits (96), Expect = 2e-12 Identities = 75/93 (81%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 109752 GTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGA 109811 ||||||||| | |||||||| || | | || |||||||| ||||| || |||||||| Sbjct 392 GTAGATGTTGCTGGTGTAGGGCTCAATGGATTCGTTGTTGCCCAGGATCTGAGCAGTGGA 333 Query 109812 AGCTGTGGGCATGGGAGCCATGAGAAGACTGTT 109844 |||||| |||||||| | || |||||| ||||| Sbjct 332 AGCTGTTGGCATGGGGGACAGGAGAAGGCTGTT 300 >seq797 Length=179301 Score = 84.2 bits (92), Expect = 3e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 110316 CTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACC 110375 ||| || ||| |||||| |||| ||||| || || | |||| ||||| ||| || Sbjct 68287 CTCATCCTTGCTGGTGTACTCCACGATTTCTGTGCAGAGGTTGCTGCTCTTGATGGTGCC 68228 Query 110376 CAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACC 110435 || ||||| ||| || ||| |||||| | |||||| ||||||||||| || || || Sbjct 68227 CAGGTTCTGCTGGTTGCTCTTGCGGTTGCAGGAATCCTTGTAGAGCATGTAGGGAGTCCC 68168 Query 110436 AGTTTCCGTCTGTGACTTGAGAATGG 110461 ||| || ||||| || | || |||| Sbjct 68167 AGTCTCTGTCTGGGATTCGATGATGG 68142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588573022620800