Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calypte_20anna_20[refseq_20GCF_5F000699085.1_202014-06-06]
54,736 sequences; 1,105,676,412 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq2435 114 1e-20
seq1213 86.0 5e-12
>seq2435
Length=9698745
Score = 114 bits (126), Expect = 1e-20
Identities = 139/184 (76%), Gaps = 4/184 (2%)
Strand=Plus/Minus
Query 30150 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30209
||| || |||| |||||||| || |||||||||||||| || || || ||||| | |||
Sbjct 8898882 CATATCTTTGTATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGTCCTAAGTC 8898823
Query 30210 TCCCTCTTCCCT-GTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGT 30268
||||| || || ||||| ||| ||| ||| |||| || || | || || ||||| |
Sbjct 8898822 CCCCTCCTCTCTGGTGCT-GAAACCCTGCTTATCCAGGAACTCACGTGATCCATTGGCAT 8898764
Query 30269 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACC 30328
|||| ||||| || ||||| | ||||| ||||||| ||||| || || || || || |
Sbjct 8898763 CCCAAATCTTCACACCCTTTGCAGAGAGTTCTTTGGCATTTGTAGAGCC-CT-ACAAAAC 8898706
Query 30329 ACAG 30332
||||
Sbjct 8898705 ACAG 8898702
>seq1213
Length=7152351
Score = 86.0 bits (94), Expect = 5e-12
Identities = 82/105 (78%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 112105 AGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATG 112164
||||||||||| || |||| || || |||||| | | ||| | |||||| || || |||
Sbjct 6676340 AGCTCCCTGCTTAGCACTATATTAATTCTGTCTTTTAAAGGCCGATTCTTCTCAGGAATG 6676281
Query 112165 GAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 112209
|||||||| || ||||| |||||||||| | ||||| || |||
Sbjct 6676280 GAGAACCAGGTTTTTCTGCCCATTATCAGTGCATTCTGTTTCCCT 6676236
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408345013242128
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |