Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calypte_20anna_20[refseq_20GCF_5F000699085.1_202014-06-06]
54,736 sequences; 1,105,676,412 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq797 122 2e-22
seq3230 95.1 2e-14
seq25906 86.0 1e-11
>seq797
Length=179301
Score = 122 bits (134), Expect = 2e-22
Identities = 127/164 (77%), Gaps = 2/164 (1%)
Strand=Plus/Minus
Query 213528 GTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGG 213587
|||||||||| ||| || ||||| |||||||||| |||||||||||||||||| |||
Sbjct 68274 GTGTACTCCACGATTTCTGTGCAGAGGTTGCTGCTCTTGATGGTGCCCAGGTTCTGCTGG 68215
Query 213588 TTTGACTTTGCGTTGGCAG-AATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTG 213646
|| ||| ||| | |||| |||||||||||||||||||||| | ||| |||||| |||
Sbjct 68214 TTGCTCTT-GCGGTTGCAGGAATCCTTGTAGAGCATGTAGGGAGTCCCAGTCTCTGTCTG 68156
Query 213647 GGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCC 213690
||| | | || |||||| | | |||||| |||||||
Sbjct 68155 GGATTCGATGATGGAATACCAGAGCTGCTGGGCCTTCACCACCC 68112
Score = 98.7 bits (108), Expect = 2e-15
Identities = 151/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 213141 CCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCG 213200
|||||||| || || ||||||||| | ||||| || ||||||||||| |||||
Sbjct 72074 CCTTTGCTGACAGGAGAGCCCTGGTAGGTTTCATAGGGCCCCTGCTCCTTGGCGAGCTCA 72015
Query 213201 CAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTG 213260
||| || | || ||| |||| |||||||| ||||| |||| | |||||||| ||
Sbjct 72014 CAGCTGGCTTCCAAGGCCCCGTAATAGATGGTCTCAAAGATCTGCTGGTTGAGCTGCTGT 71955
Query 213261 GCCTCTGGGGACGTGAAGGG-CATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGAC 213319
|||| ||| | ||||| ||| |||| | ||| | || ||||| ||||| ||
Sbjct 71954 GCCTGGGGGCTCTCAAAGGGATATC-TCATCAGGATGAAGGCGTCTGCCAGGCCCTGCAC 71896
Query 213320 CCCGATGCCGATGGGTCTGTGTCTCAGGTTAGA 213352
||||| |||||||| | || | | |||| ||
Sbjct 71895 GCCGATCCCGATGGGGCGATGGCGCCGGTTGGA 71863
Score = 95.1 bits (104), Expect = 2e-14
Identities = 100/129 (78%), Gaps = 2/129 (2%)
Strand=Plus/Minus
Query 212696 GTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATA-T 212754
||| |||||||| |||||||| ||||| | | ||||| || ||||| | | ||| |
Sbjct 77261 GTTGAGGGACTGGCTCTGGTCGATGAAAGCTCCTCTGTCCGCTGCCATCTTCAGGATGGT 77202
Query 212755 CTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGG 212814
|| ||||||||| ||||||||| |||||| ||| | || |||||||| |||| |||
Sbjct 77201 CT-TCTGGGAGATCTCCCACACTGTCTTGTAGAGCTGCTTCAGGTCCTCAGGGATCTCGG 77143
Query 212815 GGATGTTCT 212823
|||||||||
Sbjct 77142 GGATGTTCT 77134
Score = 87.8 bits (96), Expect = 3e-12
Identities = 114/158 (72%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 214185 CTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATA 214244
|| ||||||||||||||| | ||| | |||||| ||||||||| ||| ||| | |
Sbjct 58547 CTGGAGAGCTGGGGCCTGTTGGTGCCTGCGTTGAAGAGCGTGGGGGAGGCGTGGGTGAAC 58488
Query 214245 AACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATC 214304
|| | | ||| ||||| |||||||||| | | | | ||||||| ||||||||
Sbjct 58487 CACCTCTCAGACAGGAGGTTGTAGGTCTCGATGGCGGCCTCGATGTCGGTTCTGTGGATC 58428
Query 214305 TGTAGAGCGCACCTCATCAGCATGTGCTGGGGCCTCTC 214342
| || ||||||||||||||||||||| | |||
Sbjct 58427 CCCACGGCCACCCTCATCAGCATGTGCTGGGGACGCTC 58390
Score = 84.2 bits (92), Expect = 4e-11
Identities = 109/151 (72%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 213813 ACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTC 213872
|||| | |||||| || || || | ||| || || ||| |||||||||| ||| |
Sbjct 66446 ACTCGTTTCATGAAGAGATCAGGAATCCAGAGGGCAAAGAAAAGGTCCCTGGCTCTCTGC 66387
Query 213873 TCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGC 213932
|| ||| |||| ||| || | || || || |||||||||||| |||||| |||
Sbjct 66386 TCCTCCTTCCCAGTGTTCTTCTTTAAGTCAAGGAACTCAAAGATGTCCAAGTGCCAGGGC 66327
Query 213933 TCCATGTAGATGGCAAAGGCGCCCGGCCTCT 213963
|||| ||||||||||| || || || ||||
Sbjct 66326 TCCAGATAGATGGCAAAAGCTCCAGGTCTCT 66296
>seq3230
Length=1922383
Score = 95.1 bits (104), Expect = 2e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 241415 AGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGT 241474
||||| | ||| ||||| ||||| ||||| ||||| || | | ||||| || |||
Sbjct 1248976 AGGACTTTCTGCTTGAGCTGGGCGACCTGCTCCCGGAGCAGGCTGGCGGTGGAGGCCAGC 1248917
Query 241475 CCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGT 241534
| | ||| | | |||||| |||||||| || |||| || | ||| | ||||||
Sbjct 1248916 TCCGTGTTCTGACTCTTGAGACTTTTCACTTTTTCTTCCAAACGAGAGATCCTTTCCAGC 1248857
Query 241535 TTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTG 241594
|| | | ||| ||||| | || || | || |||| | | ||| ||||||||||||
Sbjct 1248856 TTCCTCTTGCGACATTTAGAAGCGGCGATCCGATTCCTCAAACGCTTGCGTTCCGCCTTG 1248797
Query 241595 ATGCGTTCCTGGTCCTCCATGTCGATCGGAGA 241626
|| || ||||| ||||||||||| || ||
Sbjct 1248796 ATACGCTCCTGCGTGTCCATGTCGATGGGGGA 1248765
>seq25906
Length=586
Score = 86.0 bits (94), Expect = 1e-11
Identities = 100/135 (74%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 212915 TATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGAT 212974
|| ||| || || |||||||| ||||| | ||| | ||| ||||||||||| ||
Sbjct 425 TACCTGAAACTCTCCTGAGAGGACCCTGCGGGTGTAGATGTTGCTGGTGTAGGGCTCAAT 366
Query 212975 GCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAG 213034
| |||||||| ||||| ||||| |||||| ||||| |||||||| | || || ||
Sbjct 365 GGATTCGTTGTTGCCCAGGATCTGAGCAGTGGAAGCTGTTGGCATGGGGGACAGGAGAAG 306
Query 213035 ACTGTTCCTCACTCC 213049
|||||||| || ||
Sbjct 305 GCTGTTCCTGACCCC 291
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 930895445258240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |