Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calypte_20anna_20[refseq_20GCF_5F000699085.1_202014-06-06]
54,736 sequences; 1,105,676,412 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq338 120 2e-21
seq1844 87.8 1e-11
>seq338
Length=1383603
Score = 120 bits (132), Expect = 2e-21
Identities = 116/149 (78%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 474728 GTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACT 474787
|| ||| |||| ||| | ||||| ||||| ||||| ||||| || || ||||| || |||
Sbjct 65767 GTTACTAATGCTGTAGTGACTGTGCCAGCCTATTTCAATGACTCCCAGCGTCAGGCTACT 65826
Query 474788 AAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCA 474847
|||||||| |||| |||||||| || || || | | || || ||||| ||||||||
Sbjct 65827 AAAGATGCAGGAACCATTGCAGGGCTCAACGTGCTGAGAATCATCAATGAGCCAACAGCT 65886
Query 474848 GCCGCACTTGCTTATGGTCTTGATAAGAA 474876
|| || ||||||||||||| || |||||
Sbjct 65887 GCTGCCATTGCTTATGGTCTGGACAAGAA 65915
Score = 98.7 bits (108), Expect = 6e-15
Identities = 77/92 (84%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 476090 GGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCA 476149
|||||||| |||||||||||||| || ||||| |||||||| || ||||||||||||||
Sbjct 67406 GGTATTCCCCCTGCTCCCAGAGGTGTACCTCAGATTGAAGTAACCTTTGATATTGATGCC 67465
Query 476150 AATGGTATTCTTAATGTTACTGCTTGTGATAA 476181
||||| || || ||||| ||||| |||||
Sbjct 67466 AATGGCATCCTCAATGTGTCTGCTGTGGATAA 67497
>seq1844
Length=2686333
Score = 87.8 bits (96), Expect = 1e-11
Identities = 111/153 (73%), Gaps = 0/153 (0%)
Strand=Plus/Minus
Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676
|||||| || ||||| |||||||| || || | || |||||||| ||||| ||||||||
Sbjct 2460454 ATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTT 2460395
Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736
||| || ||||| || ||| ||||| || ||| || | | || ||||| ||
Sbjct 2460394 GTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGAT 2460335
Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
||||| || || || ||||| || || || ||
Sbjct 2460334 GGTTTTGCCAGTCAGGGTCTTCACAAAGATCTG 2460302
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3265831307380928
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |