Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calypte_20anna_20[refseq_20GCF_5F000699085.1_202014-06-06] 54,736 sequences; 1,105,676,412 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq338 120 2e-21 seq1844 87.8 1e-11 >seq338 Length=1383603 Score = 120 bits (132), Expect = 2e-21 Identities = 116/149 (78%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 474728 GTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACT 474787 || ||| |||| ||| | ||||| ||||| ||||| ||||| || || ||||| || ||| Sbjct 65767 GTTACTAATGCTGTAGTGACTGTGCCAGCCTATTTCAATGACTCCCAGCGTCAGGCTACT 65826 Query 474788 AAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCA 474847 |||||||| |||| |||||||| || || || | | || || ||||| |||||||| Sbjct 65827 AAAGATGCAGGAACCATTGCAGGGCTCAACGTGCTGAGAATCATCAATGAGCCAACAGCT 65886 Query 474848 GCCGCACTTGCTTATGGTCTTGATAAGAA 474876 || || ||||||||||||| || ||||| Sbjct 65887 GCTGCCATTGCTTATGGTCTGGACAAGAA 65915 Score = 98.7 bits (108), Expect = 6e-15 Identities = 77/92 (84%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 476090 GGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCA 476149 |||||||| |||||||||||||| || ||||| |||||||| || |||||||||||||| Sbjct 67406 GGTATTCCCCCTGCTCCCAGAGGTGTACCTCAGATTGAAGTAACCTTTGATATTGATGCC 67465 Query 476150 AATGGTATTCTTAATGTTACTGCTTGTGATAA 476181 ||||| || || ||||| ||||| ||||| Sbjct 67466 AATGGCATCCTCAATGTGTCTGCTGTGGATAA 67497 >seq1844 Length=2686333 Score = 87.8 bits (96), Expect = 1e-11 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| || ||||| |||||||| || || | || |||||||| ||||| |||||||| Sbjct 2460454 ATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTT 2460395 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 ||| || ||||| || ||| ||||| || ||| || | | || ||||| || Sbjct 2460394 GTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGAT 2460335 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| || || || ||||| || || || || Sbjct 2460334 GGTTTTGCCAGTCAGGGTCTTCACAAAGATCTG 2460302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3265831307380928