Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calypte_20anna_20[refseq_20GCF_5F000699085.1_202014-06-06] 54,736 sequences; 1,105,676,412 total letters Query= NC_020474.2 Length=180421 Score E Sequences producing significant alignments: (Bits) Value seq766 217 2e-51 seq618 136 5e-27 >seq766 Length=6580670 Score = 217 bits (240), Expect = 2e-51 Identities = 648/991 (65%), Gaps = 9/991 (1%) Strand=Plus/Minus Query 160045 TGTGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATT 160104 |||| ||||||| || |||| ||||| || || || |||||| || ||| || | Sbjct 3451696 TGTGCCGCAGATACTCTTCCAAACATTTCACTGCAAAGGGGTCAACATCAGTGTCAAACT 3451637 Query 160105 TATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACA 160164 |||| || || | ||||| ||| |||| ||||||| || |||||| || || | Sbjct 3451636 TATTAGCAAAGAAGTGGTG---GTTTCGTAGCATCCAGTTCAGGTCTCCTACTCCAAAAA 3451580 Query 160165 CGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGT 160224 | || || || || | || || || |||| || ||||| | || ||||| | ||| | Sbjct 3451579 CACAAACAGAGCGAACATGAACTCCACTGCATGGTGGGTAGGGTGCACCTTTAGACACAT 3451520 Query 160225 CACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGT 160284 ||||||| ||||||||||||| ||||| || || | || | |||||| || ||| | Sbjct 3451519 CACCTTCAAAGTACTGCCACTTGACAAATCTAGCCAGTGCATTCATGTCAGAAACGTCAT 3451460 Query 160285 ATTTGTACATCAGGGGAA-CGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCAC 160343 | || | || || ||| | || || || || | || || | ||| | || ||||| Sbjct 3451459 ACTTCT-CACTAGAAGAAACTGCTCCAGGCACTTCAGGGATTCTCTGAATTGTTGCCCAT 3451401 Query 160344 AGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCG-ATTAACCT 160402 |||| || || ||||| || ||||| || | ||| || ||||||| || | || || Sbjct 3451400 AGGTACTCATCTGGGCTATAAGTGTCTTTTGCCCACTCAATGAACT-TCAGTATCTTGCT 3451342 Query 160403 GTCCCGCAGAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAA 160462 || | | || ||| | |||| | || ||||| || || || ||||| || Sbjct 3451341 GTTTTCTAATATGTATTCAACAAATCTTCTGCTAACTACAAAATAGGCACTACCGGAAAA 3451282 Query 160463 TATCGGTATGGGTATAGGCGGCGTGTCTTTGTCCTGACCGGTGTTAGACACCACTCCTTT 160522 || || || | ||| || | |||||| || ||||| | || | Sbjct 3451281 AATTGGAGTGCTGAGAGGTGGTAGCTGTTTGTCTATGCCTGTGTTCTTTATTTTACCATC 3451222 Query 160523 CACCAGCGCGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTTCCGTCTC 160582 | | | | || | || |||||||| || || | | ||||| ||| || || Sbjct 3451221 AATAATCTCATGGTGTTTTTTCCACCTTACTTCTTTATAAGCAGGCATTTTTTCTGTTTC 3451162 Query 160583 TAGACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAG 160642 || ||||| | || | || | |||| | || || || || |||| ||||| | Sbjct 3451161 CAGGCTGTTTTCGCCCTTAAGGGCCTTCAATTTCTCTACTATTTCCTGGTTGGTCTTTAT 3451102 Query 160643 CGGAAAGTCGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAG 160702 || ||||| | || || | ||| || | ||| ||||| || | || || || Sbjct 3451101 AGGGAAGTCCATGCCACAAAGGTTGATTAGGTATTTCCAGTTTGAACTTCTTCTGTAGAG 3451042 Query 160703 GTCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTC 160762 || |||| |||||||||||||||||||| | |||||| ||||| ||||| || |||| Sbjct 3451041 ATCTTTCATACAATTAATATCTGCCTGCACCCTGCTCCAAGAAGCATACACAACACTCTC 3450982 Query 160763 TAGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCGCCAGAAA 160822 || | ||||| | |||||| ||||| ||||| || || ||||| ||| | ||| || Sbjct 3450981 TAACTGACTGGAAATAAAGACATTATCAAAACATGAGACTATTCCTTTCACAG-CAGCAA 3450923 Query 160823 GAACA-TCTTATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGA 160881 ||| | || | |||| ||| || || | ||| || | |||||||| || || | Sbjct 3450922 GAAAAGACTCTGGAGACTTTTTGTCAACATGAATGCAGTAAAAATTCTGAGGGGCATATA 3450863 Query 160882 TGGCCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTA 160941 | | || || | || |||| |||||| || || |||| | ||| || ||||| || | Sbjct 3450862 TTGATCTTAGAAGTCTATCGAGCATCTCAATTTTGTGATAAACCACTATTGAGTAAGCAA 3450803 Query 160942 TCGGAAACTCGGTCTCCTCGCGACTCAGGGACCCGGTCAGGTACTTTCGCGTCTTGATAA 161001 | ||||| || | || || || ||||| | | | ||| || | ||||| | | Sbjct 3450802 TTGGAAATTCTGCTTCTTCATTGCTGAGGGATTCCATAATGTATTTCCTAGTCTTCGTGA 3450743 Query 161002 AATAATCACAATCCCGCGTCATGTTGATATA 161032 | | |||| || |||||||| ||||| Sbjct 3450742 AGGAGGCACAGTCTGCTGTCATGTTAATATA 3450712 >seq618 Length=1768260 Score = 136 bits (150), Expect = 5e-27 Identities = 238/346 (69%), Gaps = 3/346 (1%) Strand=Plus/Plus Query 160044 CTGTGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAAT 160103 ||||| ||||| || || || ||||| || | |||| |||| || ||| || Sbjct 1439550 CTGTGGCGCAGGTGCTCCTCGAGACACTGTATGGCGGCATCGTCCACCAAGGGGTCAAAC 1439609 Query 160104 TTATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAAC 160163 || || || || || ||||| | ||| || | |||| |||| || || |||| | Sbjct 1439610 TTGTTGGCCAAGAGTTGGTGC---TGCTGGAGCAGCCAGGGCACATCACCCACCCCGTAG 1439666 Query 160164 ACGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACG 160223 | |||||| | || |||| |||| |||| |||||||| | || ||||| | Sbjct 1439667 ATGCAGACCGCCCGCTGGTGCTGGCCGGTGCAGGGCGGGTAGGGCGCACCTTTGCTGGTG 1439726 Query 160224 TCACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCG 160283 ||||| || |||||||||||| || | | || | || |||||| ||| | | Sbjct 1439727 TCACCCTCCATGTACTGCCACTTGACCACACGGGGCAAGGCAATCATGTCCGAGAGATGG 1439786 Query 160284 TATTTGTACATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCAC 160343 | |||| || |||| | |||||| || || |||||||| || | ||||||||||| Sbjct 1439787 AACTTGTCATTCTGGGGCATGGCACCTGGCACACCGGGCATGCGGTTGAGGGTGGCCCAG 1439846 Query 160344 AGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACT 160389 | ||| |||||||||||||| |||||||| | ||| || | ||||| Sbjct 1439847 ACGTGCTCGTCGGGGCTGTAGGTGTCCTTGGCCCACTCAAGGAACT 1439892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 576824266623360