Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calypte_20anna_20[refseq_20GCF_5F000699085.1_202014-06-06]
54,736 sequences; 1,105,676,412 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq332 210 3e-48
seq2120 174 2e-37
seq1398 168 1e-35
seq325 96.9 5e-14
>seq332
Length=2130183
Score = 210 bits (232), Expect = 3e-48
Identities = 200/256 (78%), Gaps = 0/256 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| ||||| |||||| ||||||| |||||| |||
Sbjct 264541 TGTACTTGGTGACAGCCTTGGTGCCCTCGGAGACTGCGTGCTTGGCCAGCTCGCCGGGCA 264600
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||| ||||| || ||||||||||| || | | ||| || ||||||||| |
Sbjct 264601 GCAGCAGCCGCACTGCCGTCTGGATCTCCCGCGAGGTGATAGTAGAGCGCTTGTTGTAGT 264660
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| |||||| | ||||||| |||| ||||||||||| || |||||||
Sbjct 264661 GCGCCAGGCGAGAGGCCTCCCCGGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCA 264720
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | || ||||||||| |||||||||||||||||| ||||||||||
Sbjct 264721 TGATGCCCATGGCCTTCGACGAGATGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 264780
Query 1485710 AAACAAAGGACGAGTA 1485725
| || || ||||||
Sbjct 264781 ACACGTAGATCGAGTA 264796
Score = 201 bits (222), Expect = 2e-45
Identities = 191/244 (78%), Gaps = 0/244 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| ||||| |||||| ||||||| |||||| |||
Sbjct 286249 TGTACTTGGTGACAGCCTTGGTGCCCTCGGAGACTGCGTGCTTGGCCAGCTCGCCGGGCA 286190
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||| ||||| || ||||||||||| || | | ||| || ||||||||| |
Sbjct 286189 GCAGCAGCCGCACTGCCGTCTGGATCTCCCGCGAGGTGATAGTAGAGCGCTTGTTGTAGT 286130
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| |||||| | ||||||| |||| ||||||||||| || |||||||
Sbjct 286129 GCGCCAGGCGAGAGGCCTCCCCGGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCA 286070
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | || ||||||||| |||||||||||||||||| | ||||||||
Sbjct 286069 TGATGCCCATGGCCTTCGACGAGATGCCCGTGTCGGGGTGCACCTGCTTCAACACCTTGT 286010
Query 1485710 AAAC 1485713
| ||
Sbjct 286009 ACAC 286006
Score = 197 bits (218), Expect = 2e-44
Identities = 196/254 (77%), Gaps = 0/254 (0%)
Strand=Plus/Minus
Query 1485472 TACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATG 1485531
|| |||||||| |||||||| ||||| ||||| |||||| ||||||| | ||| |||
Sbjct 304214 TATTTGGTGACAGCCTTGGTGCCCTCGGAGACTGCGTGCTTGGCCAGCGCACCGGGCAGC 304155
Query 1485532 ATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGC 1485591
||| ||||| || ||||||||||| || | | ||| ||| ||||||||| | |
Sbjct 304154 CGCAGCCGCACTGCCGTCTGGATCTCCCGCGAGGTGATGGTGGAGCGCTTGTTGTAGTGA 304095
Query 1485592 GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATG 1485651
||||||||| |||||| | ||||||| |||| |||||||||||||| |||||||||
Sbjct 304094 GCCAGGCGGGAGGCCTCCCCGGCGATGCGCTCGAAGATGTCGTTGACAAAGGAGTTCATG 304035
Query 1485652 ATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAA 1485711
|| ||| | ||| ||||||||| ||||||||||||||||| |||||||||||
Sbjct 304034 ATGCCCATGGCCTTGGATGAGATGCCCGTATCGGGGTGCACCTGCTTCAGCACCTTGTAC 303975
Query 1485712 ACAAAGGACGAGTA 1485725
|| || ||||||
Sbjct 303974 ACGTAGATCGAGTA 303961
Score = 187 bits (206), Expect = 4e-41
Identities = 181/233 (78%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 1485493 CCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGG 1485552
||| | ||||| |||||| ||||||| |||||| ||| | ||| ||||| || ||||||
Sbjct 359725 CCCGCGGAGACTGCGTGCTTGGCCAGCTCGCCGGGCAGCAGCAGCCGCACTGCCGTCTGG 359666
Query 1485553 ATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCGCCAGGCGGCCGGCCTCGGTG 1485612
||||| || | | ||| ||| ||||||||| | |||||||||| ||||| |
Sbjct 359665 ATCTCCCGCGAGGTGATGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGAGACGCCTCCCCG 359606
Query 1485613 CCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGATTTGTTGGAG 1485672
||||||| |||| ||||||||||| || ||||||||||| ||||| ||| ||||
Sbjct 359605 GCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCATGATGCCCATCGCTTTCGAGGAG 359546
Query 1485673 ATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAAACAAAGGACGAGTA 1485725
|||||| |||||||||||||||||| ||||||||||| || || ||||||
Sbjct 359545 ATGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGTACACGTAGATCGAGTA 359493
Score = 109 bits (120), Expect = 9e-18
Identities = 92/113 (81%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| ||||| |||||| ||||||| ||||| |||
Sbjct 368129 TGTACTTGGTGACAGCCTTGGTGCCCTCCGAGACTGCGTGCTTGGCCAGCTCGCCCGGCA 368070
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTG 1485582
| ||| ||||| || ||||||||||| || | | |||| ||| |||||||
Sbjct 368069 GCAGCAGCCGCACTGCCGTCTGGATCTCCCGCGAGGCGATGGTGGAGCGCTTG 368017
Score = 102 bits (112), Expect = 1e-15
Identities = 77/91 (85%), Gaps = 0/91 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| ||||| |||||| ||||||| |||||| |||
Sbjct 359812 TGTACTTGGTGACAGCCTTGGTGCCCTCGGAGACTGCGTGCTTGGCCAGCTCGCCGGGCA 359753
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCG 1485560
| ||| ||||| || ||||||||||| ||
Sbjct 359752 GCAGCAGCCGCACCGCCGTCTGGATCTCCCG 359722
>seq2120
Length=20421
Score = 174 bits (192), Expect = 2e-37
Identities = 185/244 (76%), Gaps = 0/244 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||| |||||||| ||||| ||||| |||||||||||| |||||||||| ||| |||
Sbjct 11194 TGTACTTCGTGACGGCTTTGGTGCCCTCCGAGACGGCGTGCTTGGCCAGTTCCCCGGGCA 11135
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||| |||||||| ||||||||||| |||| | ||| ||| ||| ||||| |
Sbjct 11134 GCAGCAGCCGCACGGCAGTCTGGATCTCCCGGGAGGTGATGGTGGAGCGTTTGTTGTAGT 11075
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| |||| ||| || || | | ||||| |||| ||||||||||| || |||||||
Sbjct 11074 GAGCCAAGCGCGAAGCTTCCCCGGCAATGCGCTCGAAAATGTCGTTGACGAAGGAGTTCA 11015
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| ||||| || |||||| ||||||||||| || || || |
Sbjct 11014 TGATGCCCATGGCCTTGGAAGAGATACCGGTGTCGGGATGCACCTGCTTCAGGACTTTAT 10955
Query 1485710 AAAC 1485713
||||
Sbjct 10954 AAAC 10951
>seq1398
Length=23311805
Score = 168 bits (186), Expect = 1e-35
Identities = 191/256 (75%), Gaps = 0/256 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||||||||| |||||| ||||||| || ||| | |
Sbjct 8347550 TGTACTTGGTGACAGCCTTGGTGCCCTCTGAGACAGCGTGCTTGGCCAGCTCCCCGGGGA 8347491
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| |||||| || || ||||||||||| |||| | ||| ||| |||||||||
Sbjct 8347490 GCAGCAGGCGTACAGCTGTCTGGATCTCCCGGGAGGTGATGGTGGAGCGCTTGTTGTAAT 8347431
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| ||||||||| ||| || | || || || | ||||||||||| || |||||||
Sbjct 8347430 GGGCCAGGCGGGAGGCTTCTCCAGCAATACGCTCAAAGATGTCGTTGACGAAGGAGTTCA 8347371
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| || ||||| ||| ||||| |||||||| ||||| ||||
Sbjct 8347370 TGATGCCCATGGCCTTGGAAGAAATGCCGGTGTCAGGGTGGACCTGCTTCAGCACTTTGT 8347311
Query 1485710 AAACAAAGGACGAGTA 1485725
| ||| || |||||
Sbjct 8347310 AGACATAGATGGAGTA 8347295
>seq325
Length=5823465
Score = 96.9 bits (106), Expect = 5e-14
Identities = 89/113 (79%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 796303 ACCTCCTCGGCGGTCCAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGG 796362
|||||||| || ||||| ||||| ||||| ||||| |||||||||| ||| || ||
Sbjct 5215042 ACCTCCTCCGCCGTCCAGAAGGAAGCCTCAGCCTTCTTGTACATCTGCCAGATGTCGTGA 5215101
Query 796363 TAGCGGATGGGGAACAGAACAAAGCGATTGGGGTTCTCGCGTAGCAGCGGCTC 796415
|| |||||||||| | |||||||| ||| || || ||||||||||||||
Sbjct 5215102 TACTGGATGGGGAAGATGACAAAGCGGCGGGGATTGTCCCGTAGCAGCGGCTC 5215154
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7910423882029104
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |