Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calypte_20anna_20[refseq_20GCF_5F000699085.1_202014-06-06]
54,736 sequences; 1,105,676,412 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq324 194 3e-44
seq1844 141 2e-28
seq1981 118 2e-21
>seq324
Length=3932543
Score = 194 bits (214), Expect = 3e-44
Identities = 179/227 (79%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| ||||||| |||||| || |||||||||||||| || ||||| || || || |||||
Sbjct 118981 CCACCTCTCAGACGCAGCACCAAGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCAGAC 118922
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | | || ||||| || || || ||||||||||| || || || |||||||| ||
Sbjct 118921 AGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGGGGA 118862
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| ||||| ||||| || ||||| ||||| |||||||| || || ||| | || || ||
Sbjct 118861 ATGCCTTCTTTATCCTGGATCTTGGCTTTGACATTTTCGATGGTGTCACTGGGCTCAACC 118802
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||| || || |||||||||||||| ||||| ||||| ||||||||
Sbjct 118801 TCCAGGGTGATGGTCTTGCCTGTCAAGGTCTTCACAAAGATCTGCAT 118755
Score = 172 bits (190), Expect = 1e-37
Identities = 175/228 (77%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| ||||||| |||||| || |||||||||||||| || ||||| || || || |||||
Sbjct 118753 CCACCTCTCAGACGCAGCACCAAGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCAGAC 118694
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | | || ||||| || || || ||||||||||| | || || || || || ||
Sbjct 118693 AGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGGTCGGGGGGA 118634
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| || ||||| || || ||||| || || |||||||| || || ||| | || || |||
Sbjct 118633 ATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTTTCGATGGTGTCACTGGGCTCAACT 118574
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811
|||| ||| || ||||||||||||| ||||| || || |||||||||
Sbjct 118573 TCCAGAGTGATGGTCTTGCCTGTCAGGGTCTTCACGAAGATCTGCATT 118526
Score = 152 bits (168), Expect = 1e-31
Identities = 171/229 (75%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || |||| ||||| || | || || || ||||| ||||| || || || ||||
Sbjct 119211 TACCACCCCTCAGGCGCAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAG 119152
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| || | | || ||||| || || || ||||||||||| || || || || || || |
Sbjct 119151 ACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGG 119092
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || || ||||| || || ||||| || || |||||||| || || ||| | || || |
Sbjct 119091 GAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTTTCGATGGTGTCACTGGGCTCAA 119032
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| |||| || || |||||||||||||| ||||| ||||| ||||||||
Sbjct 119031 CCTCCAGGGTGATGGTCTTGCCTGTCAAGGTCTTGACAAAGATCTGCAT 118983
>seq1844
Length=2686333
Score = 141 bits (156), Expect = 2e-28
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| || |||| ||||| || | || || || || |||||| | || || || || ||
Sbjct 2460069 CCACCCCTCAGGCGCAGCACAAGATGGAGGGTTGACTCTTTCGGGATGTTGTAGTCGGAG 2460010
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | | |||||||| || || || ||||||||||| || || || || || || ||
Sbjct 2460009 AGGGTGCGCCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGA 2459950
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| |||||||| || || ||||| ||||| || || ||||| || ||| | || || ||
Sbjct 2459949 ATGCCTTCCTTGTCCTGGATCTTGGCTTTCACGTTCTCAATGGTGTCACTGGGCTCAACC 2459890
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811
|| | ||||| |||||||| |||| ||||| ||||| |||||||||
Sbjct 2459889 TCAAGGGTTATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATT 2459842
Score = 140 bits (154), Expect = 6e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| || |||| ||||| || | ||||| || || |||||||| || || || || ||
Sbjct 2460525 CCACCCCTCAGGCGCAGCACGAGATGCAGGGTTGACTCTTTCTGGATGTTGTAGTCGGAG 2460466
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | | || ||||| || || || ||||||||||| || || || ||||| || ||
Sbjct 2460465 AGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGA 2460406
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| |||||||| || || ||||| || || ||||| ||||| || ||| | || || ||
Sbjct 2460405 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACC 2460346
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | || || || ||||| |||| ||||| ||||| ||||||||
Sbjct 2460345 TCGAGGGTGATGGTTTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 2460299
Score = 129 bits (142), Expect = 1e-24
Identities = 166/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| ||||||| ||||| || | || || || ||||| ||||| || || || ||||
Sbjct 2460299 TACCCCCTCTCAGGCGCAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAG 2460240
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| || | | || ||||| | || || ||||||||||| || || || || || || |
Sbjct 2460239 ACAGGGTGCGCCCATCTTCCAACTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGG 2460180
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || ||||| ||||| || ||||| ||||| || || ||||| || || | || || |
Sbjct 2460179 GAATGCCTTCTTTATCCTGGATCTTGGCTTTCACGTTCTCAATGGTGTCGCTGGGCTCAA 2460120
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| || | || || || || || |||| ||||| ||||| ||||||||
Sbjct 2460119 CCTCGAGGGTGATGGTTTTCCCAGTCAGGGTCTTCACAAAGATCTGCAT 2460071
Score = 125 bits (138), Expect = 1e-23
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| || |||| ||||| || | || || || ||||| ||||| || || || || ||
Sbjct 2460753 CCACCCCTCAGGCGCAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAG 2460694
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | | |||||||| || || || ||||||||||| || || || || || || ||
Sbjct 2460693 AGGGTGCGCCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGA 2460634
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| ||||| || || || ||||| || || ||||| ||||| || ||| | || || ||
Sbjct 2460633 ATGCCTTCTTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACC 2460574
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | || || || || || |||| ||||| ||||| ||||||||
Sbjct 2460573 TCGAGGGTGATGGTTTTCCCAGTCAGGGTCTTCACAAAGATCTGCAT 2460527
>seq1981
Length=6480852
Score = 118 bits (130), Expect = 2e-21
Identities = 124/163 (76%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 60149 GCATTATGGTGGTACTATATATCTAAAGGTATAGAATACTTAGATACGGTGTTTTTCATA 60208
|| ||||||||||| ||| | |||||||| || ||||| || ||||| || || |||||
Sbjct 1471855 GCTTTATGGTGGTATTATGTCTCTAAAGGAATTGAATATTTGGATACAGTATTCTTCATC 1471796
Query 60209 CTTAGGAAAAAGTTTAATCAGGTTAGTTTTTTACACGTATATCATCATTTTACTATGTTT 60268
|| ||||| || ||||| || ||||||| | || || ||||| ||||| || |||||
Sbjct 1471795 CTGAGGAAGAAATTTAACCAAATTAGTTTCCTTCATGTCTATCACCATTTCACCATGTTC 1471736
Query 60269 ACTTTAGGATGGGTAGGCATTAAATGGTTTGCCGGAGGTCAAG 60311
|| || | ||| | || ||||| ||| |||| || || ||||
Sbjct 1471735 ACCTTGTGGTGGATTGGTATTAAGTGGGTTGCAGGTGGACAAG 1471693
Score = 84.2 bits (92), Expect = 4e-11
Identities = 103/141 (73%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 60443 CAATTCCATATAGCTATAGGACATACCGCTATGTCCATTTACATAGATTGTCCGTTTCCA 60502
|| |||||| | |||| || || || || |||| ||||| || |||||||| || ||
Sbjct 1469060 CAGTTCCATGTGACTATTGGCCACACAGCCTTGTCTATTTATATTGATTGTCCTTTCCCT 1469001
Query 60503 AAATGGACACAATGGTCAGTTATCATTTATTCTATTACTTTTATATTACTGTTTGGTAAC 60562
||||||| || ||| || || | ||| |||| || || || || |||||||||||
Sbjct 1469000 AAATGGATGCACTGGGGTGTAATTTTCTATGCTATCACCTTCATTTTCTTGTTTGGTAAC 1468941
Query 60563 TTCTATTTTAGAACATACAAG 60583
||||| | | | ||||| |||
Sbjct 1468940 TTCTACTATCGGACATATAAG 1468920
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981138639675504
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |