Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calypte_20anna_20[refseq_20GCF_5F000699085.1_202014-06-06]
54,736 sequences; 1,105,676,412 total letters
Query= NC_024696.1
Length=180800
Score E
Sequences producing significant alignments: (Bits) Value
seq766 185 1e-41
seq618 86.0 7e-12
>seq766
Length=6580670
Score = 185 bits (204), Expect = 1e-41
Identities = 582/896 (65%), Gaps = 8/896 (1%)
Strand=Plus/Minus
Query 162160 ATCCAATTAAGATCCCCCGATCCGAACACGCACACGGACCGCACGTGCACGCCGCTGCAC 162219
||||| || || || || ||| || || || || || || || || || || |||||
Sbjct 3451607 ATCCAGTTCAGGTCTCCTACTCCAAAAACACAAACAGAGCGAACATGAACTCCACTGCAT 3451548
Query 162220 GGCGGATACAGGGCCCCATCGTCCACATCCCCCTCGTAGTATTGCCACTTAACGAACCTA 162279
|| || || | || || | |||||| || || |||| |||||||| || || |||
Sbjct 3451547 GGTGGGTAGGGTGCACCTTTAGACACATCACCTTCAAAGTACTGCCACTTGACAAATCTA 3451488
Query 162280 GTGATAGCCTGCATGTCGGAGGTGTCGTACTTGTACACT-GACGGCACGGCTCCAGGAAC 162338
| | || | |||||| || ||| ||||| | |||| || | || |||||||| ||
Sbjct 3451487 GCCAGTGCATTCATGTCAGAAACGTCATACTTCT-CACTAGAAGAAACTGCTCCAGGCAC 3451429
Query 162339 ACCCGGCAGTCTCTGTAGAGTAGCCCACAGGTGTTCGTCTGGACTATACGTCTCCTTCGA 162398
| || | |||||| | || ||||| |||| || ||||| ||||| || || || |
Sbjct 3451428 TTCAGGGATTCTCTGAATTGTTGCCCATAGGTACTCATCTGGGCTATAAGTGTCTTTTGC 3451369
Query 162399 CCACTCCATGAACTCCCTGACCGTTTTATCGTATAGAATGTAAGAGACGTAGGACCTGGT 162458
|||||| ||||||| | | | | | | | || ||||| || | ||| |
Sbjct 3451368 CCACTCAATGAACTTCAGTATCTTGCTGTTTTCTAATATGTATTCAACAAATCTTCTGCT 3451309
Query 162459 CACAATAAAGTACGCGCTACCAGAAAACACGGGTATGCGTATAGGAGGGGGCTCTTTGTC 162518
|| | ||| || || ||||| ||||| | || ||| | ||| || ||| ||||||
Sbjct 3451308 AACTACAAAATAGGCACTACCGGAAAAAATTGGAGTGCTGAGAGGTGGTAGCTGTTTGTC 3451249
Query 162519 TTGACCCGTGTTGACTACCATTCCCTCTACGACCACGTGTCTCTTCCTCCACCTGGCCAT 162578
| || ||||| || | || || | | | | || || ||||||| |
Sbjct 3451248 TATGCCTGTGTTCTTTATTTTACCATCAATAATCTCATGGTGTTTTTTCCACCTTACTTC 3451189
Query 162579 CTTACTGGTAGACGGGTGTTCGGTCTCTAGACTGTTACGACCCCCCAAGGCCTTCAGCTG 162638
||| | || | | ||| || || || ||||| ||| | |||||||| |
Sbjct 3451188 TTTATAAGCAGGCATTTTTTCTGTTTCCAGGCTGTTTTCGCCCTTAAGGGCCTTCAATTT 3451129
Query 162639 ACGCACCATCTCTAGATTGGTCTTAAGGGGAAAGTCGGTGCCGCAGAGATTAATAACATA 162698
|| || || | |||||||| | || ||||| |||| || || || || | ||
Sbjct 3451128 CTCTACTATTTCCTGGTTGGTCTTTATAGGGAAGTCCATGCCACAAAGGTTGATTAGGTA 3451069
Query 162699 TTTCCACTTAACGCTGAGTCCGTACAGATCCTGTAGACAGTTCAGATCGGCCTGGACGCG 162758
|||||| || || || ||| ||||| | | ||| || | ||| ||||| || |
Sbjct 3451068 TTTCCAGTTTGAACTTCTTCTGTAGAGATCTTTCATACAATTAATATCTGCCTGCACCCT 3451009
Query 162759 ACTCCACGACGCGTACACGACGCTCTCCAACCTAGTGGCGACAAAGACATTGTCGAAACA 162818
||||| || || ||||| || ||||| ||| | ||| | ||||||||| || |||||
Sbjct 3451008 GCTCCAAGAAGCATACACAACACTCTCTAACTGACTGGAAATAAAGACATTATCAAAACA 3450949
Query 162819 CGAAACTATCCCCATCACGGCCAGTGAGAACA---TCGGGTCCGCTTTCCTATCTACGTG 162875
|| ||||| || |||| || || |||| | || || ||| | || || ||
Sbjct 3450948 TGAGACTATTCCTTTCACAGC-AGCAAGAAAAGACTCTGGAGACTTTT--TGTCAACATG 3450892
Query 162876 TACGCAGTATAGATTCTGAGGGGCGTAGATGGCCCTCAGTAATCTCTCGAACATCTCTAT 162935
| |||||| | |||||||||||| || || | || || | ||| |||| |||||| ||
Sbjct 3450891 AATGCAGTAAAAATTCTGAGGGGCATATATTGATCTTAGAAGTCTATCGAGCATCTCAAT 3450832
Query 162936 CTTATGGTGTACCACGATAGAATACGCTATGGGGAACTCAGCCTCCTCGCGACTGAGAGA 162995
|| || | ||||| || || || || || || || || || || || ||||| ||
Sbjct 3450831 TTTGTGATAAACCACTATTGAGTAAGCAATTGGAAATTCTGCTTCTTCATTGCTGAGGGA 3450772
Query 162996 CCCTGTAAAGTACTTGCGGTCCCTCACAAACGCCGCACAGTCCTCCGTCATGTTAA 163051
| ||| ||| || | | || || | |||||||| | ||||||||||
Sbjct 3450771 TTCCATAATGTATTTCCTAGTCTTCGTGAAGGAGGCACAGTCTGCTGTCATGTTAA 3450716
>seq618
Length=1768260
Score = 86.0 bits (94), Expect = 7e-12
Identities = 176/262 (67%), Gaps = 0/262 (0%)
Strand=Plus/Plus
Query 162722 ACAGATCCTGTAGACAGTTCAGATCGGCCTGGACGCGACTCCACGACGCGTACACGACGC 162781
|||| ||||| | ||||| || || || || | || ||| || || || || ||
Sbjct 1440199 ACAGGTCCTGCATGCAGTTGAGGTCAGCTTGCAGTCGGGACCAGGAGGCATAGACCACTT 1440258
Query 162782 TCTCCAACCTAGTGGCGACAAAGACATTGTCGAAACACGAAACTATCCCCATCACGGCCA 162841
| |||| | |||| ||||| |||||| ||| || | || || || |||| |||
Sbjct 1440259 TTTCCAGGCGGCTGGCCACAAAAACATTGGGGAAGCAGGCCACAATGGCCCTCACAGCCT 1440318
Query 162842 GTGAGAACATCGGGTCCGCTTTCCTATCTACGTGTACGCAGTATAGATTCTGAGGGGCGT 162901
||| | | | || | || | ||| || ||||| | ||||| |||| ||
Sbjct 1440319 TCTGGAAGGTAGACGGAGACTTGTTGTCAATGTGGACACAGTAGATGTTCTGTGGGGTGT 1440378
Query 162902 AGATGGCCCTCAGTAATCTCTCGAACATCTCTATCTTATGGTGTACCACGATAGAATACG 162961
|||||| || ||| | | |||||||||||| ||||| | ||| | || || || || |
Sbjct 1440379 AGATGGACCGCAGGAGACGCTCGAACATCTCAATCTTGTTGTGGATGACCATGGAGTAGG 1440438
Query 162962 CTATGGGGAACTCAGCCTCCTC 162983
| ||||||||||| ||||| ||
Sbjct 1440439 CGATGGGGAACTCTGCCTCTTC 1440460
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578036236825600
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