Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calypte_20anna_20[refseq_20GCF_5F000699085.1_202014-06-06]
54,736 sequences; 1,105,676,412 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq1844 98.7 9e-16
seq324 87.8 2e-12
>seq1844
Length=2686333
Score = 98.7 bits (108), Expect = 9e-16
Identities = 153/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964
|| ||||| || | ||| | | |||||||||| || |||||||||||| | ||| ||
Sbjct 2460517 CAGGCGCAGCACGAGATGCAGGGTTGACTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCG 2460458
Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024
| |||||| ||||| || || | | |||| || | ||| ||||| || || ||||||||
Sbjct 2460457 CCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTC 2460398
Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084
|| || || || |||| | || | || || | ||||| || |||| ||
Sbjct 2460397 CTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACCTCGAGGGT 2460338
Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
| ||||| |||||||| || || | || ||||||||
Sbjct 2460337 GATGGTTTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 2460299
Score = 93.3 bits (102), Expect = 4e-14
Identities = 152/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964
|| ||||| || | ||| | | | || || || || ||||||||||| || ||| ||
Sbjct 2460289 CAGGCGCAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCG 2460230
Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024
| |||||| | ||| || || | | |||| || | ||| || || || || ||||||||
Sbjct 2460229 CCCATCTTCCAACTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTC 2460170
Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084
|||||| || || ||||| | || | || ||| | ||||| || |||| ||
Sbjct 2460169 TTTATCCTGGATCTTGGCTTTCACGTTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGT 2460110
Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
| ||||| |||||||| || || | || ||||||||
Sbjct 2460109 GATGGTTTTCCCAGTCAGGGTCTTCACAAAGATCTGCAT 2460071
>seq324
Length=3932543
Score = 87.8 bits (96), Expect = 2e-12
Identities = 149/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
|||| ||||| || | | ||||| || || ||||||||||| || ||| ||| |
Sbjct 118969 CGCAGCACCAAGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCA 118910
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
||||| ||||| || || | | |||| || | ||| |||||||| || ||||||||||||
Sbjct 118909 TCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCTTTA 118850
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| || || ||| | | ||| | || || | ||||| || || | || |
Sbjct 118849 TCCTGGATCTTGGCTTTGACATTTTCGATGGTGTCACTGGGCTCAACCTCCAGGGTGATG 118790
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124
|| || || |||| || || | || |||||||||
Sbjct 118789 GTCTTGCCTGTCAAGGTCTTCACAAAGATCTGCATG 118754
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476285102616960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |