Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calypte_20anna_20[refseq_20GCF_5F000699085.1_202014-06-06]
54,736 sequences; 1,105,676,412 total letters
Query= NC_026141.2
Length=4988
Score E
Sequences producing significant alignments: (Bits) Value
seq2411 118 3e-23
seq1387 98.7 3e-17
seq942 98.7 3e-17
seq3042 96.9 1e-16
>seq2411
Length=876673
Score = 118 bits (130), Expect = 3e-23
Identities = 70/73 (96%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
|||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct 41729 GGCTGAAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAT 41670
Query 2828 CCCGGGCTTCAGC 2840
|||||||||||||
Sbjct 41669 CCCGGGCTTCAGC 41657
Score = 84.2 bits (92), Expect = 7e-13
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand=Plus/Plus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
|||| ||||||||||| ||||| | | | ||||||||||||||||||| ||||||||||
Sbjct 26914 GGCTAAAGTAGCTCAGATGGGACAACGTGAGACTGAAGATCTAAAGGT-CCTGGTTCAAT 26972
Query 2828 CCCGGGCTTCAGC 2840
| | |||||||||
Sbjct 26973 CTCAGGCTTCAGC 26985
>seq1387
Length=464301
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 260383 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 260324
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 260323 CCGGGTTTCGGC 260312
>seq942
Length=2614670
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 1375856 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 1375797
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 1375796 CCGGGTTTCGGC 1375785
>seq3042
Length=1140521
Score = 96.9 bits (106), Expect = 1e-16
Identities = 65/73 (89%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
||| ||| |||||||| ||||||||| |||||||||||||||||||||||||||||| |
Sbjct 300096 GGCCGAAATAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGAT 300155
Query 2828 CCCGGGCTTCAGC 2840
|||||| ||| ||
Sbjct 300156 CCCGGGTTTCGGC 300168
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15840111240720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |