Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calypte_20anna_20[refseq_20GCF_5F000699085.1_202014-06-06] 54,736 sequences; 1,105,676,412 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq324 134 1e-26 seq1844 129 5e-25 >seq324 Length=3932543 Score = 134 bits (148), Expect = 1e-26 Identities = 158/214 (74%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 35524 CAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTC 35583 || |||||| || | ||| |||||| || |||||||| || | || ||| || | || Sbjct 118739 CAGCACCAAGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCATC 118680 Query 35584 GTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643 ||||||||||| || ||||| ||||||| ||||||||| | |||| || ||||||||| Sbjct 118679 TTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGGTCGGGGGGAATGCCCTCCTTGTC 118620 Query 35644 CATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGT 35703 | |||||| ||| | | || | | ||||| || | || || |||| ||||| || Sbjct 118619 CTGGATCTTAGCCTTGACATTTTCGATGGTGTCACTGGGCTCAACTTCCAGAGTGATGGT 118560 Query 35704 TTTACCCGTCAAAGTTTTCACAAATATCTGCATT 35737 || || |||| || ||||| || ||||||||| Sbjct 118559 CTTGCCTGTCAGGGTCTTCACGAAGATCTGCATT 118526 Score = 132 bits (146), Expect = 4e-26 Identities = 144/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| || | || ||| ||| | || ||||||||||| || ||||| Sbjct 119173 TCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAG 119114 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| || ||||||||| | |||| || |||||||||| |||||| ||| | | || Sbjct 119113 ATCAGCCTCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTT 119054 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| || | || ||||||| ||||| || || || ||||| || || ||| Sbjct 119053 TCGATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTGCCTGTCAAGGTCTTGACA 118994 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 118993 AAGATCTGCAT 118983 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 35524 CAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTC 35583 || |||||| || | ||| |||||| || |||||||| || | || ||| ||| | || Sbjct 118967 CAGCACCAAGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 118908 Query 35584 GTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643 ||||||||||| || ||||| |||| || |||||| || | |||| || || || || Sbjct 118907 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCTTTATC 118848 Query 35644 CATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGT 35703 | |||||| || | | || | | ||||| || | || ||||||| ||||| || Sbjct 118847 CTGGATCTTGGCTTTGACATTTTCGATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGT 118788 Query 35704 TTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || ||||| || |||||||| |||||||| Sbjct 118787 CTTGCCTGTCAAGGTCTTCACAAAGATCTGCAT 118755 >seq1844 Length=2686333 Score = 129 bits (142), Expect = 5e-25 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| |||| | ||| ||| |||| ||||||||||| || ||||| Sbjct 2460717 TCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGCCCGTCTTCCAGCTGCTTGCCAGCAAAG 2460658 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| || ||||||||| | |||| || || |||||| |||||| ||||| | | Sbjct 2460657 ATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCCTGGATCTTGGCCTTCACATTC 2460598 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| || | || ||||| | ||||| ||||| || |||| || |||||| Sbjct 2460597 TCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTTTTCCCAGTCAGGGTCTTCACA 2460538 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 2460537 AAGATCTGCAT 2460527 Score = 122 bits (134), Expect = 8e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || |||||||| |||| | ||| ||| | || ||||||||||| || ||||| Sbjct 2460490 CTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAA 2460431 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || |||||| || | |||| || ||||||||| |||||| ||||| | | Sbjct 2460430 GATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATT 2460371 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || | || ||||| | ||||| ||||| || |||| || ||||| Sbjct 2460370 CTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTTTTGCCAGTCAGGGTCTTCAC 2460311 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 2460310 AAAGATCTGCAT 2460299 Score = 111 bits (122), Expect = 1e-19 Identities = 136/186 (73%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 35555 ATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGC 35614 |||||||| |||| | ||| ||| |||| ||||||||||| || ||||| |||| || | Sbjct 2460024 ATGTTGTAGTCGGAGAGGGTGCGCCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTC 2459965 Query 35615 TGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTG 35674 |||||||| | |||| || ||||||||| |||||| |||| | | | ||| Sbjct 2459964 TGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCTTTCACGTTCTCAATGGTG 2459905 Query 35675 TCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGC 35734 || || | || ||||| | || || || || || |||| || |||||||| |||||| Sbjct 2459904 TCACTGGGCTCAACCTCAAGGGTTATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGC 2459845 Query 35735 ATTCTG 35740 ||| || Sbjct 2459844 ATTTTG 2459839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450485167018880