Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calypte_20anna_20[refseq_20GCF_5F000699085.1_202014-06-06]
54,736 sequences; 1,105,676,412 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq324 134 1e-26
seq1844 129 5e-25
>seq324
Length=3932543
Score = 134 bits (148), Expect = 1e-26
Identities = 158/214 (74%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 35524 CAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTC 35583
|| |||||| || | ||| |||||| || |||||||| || | || ||| || | ||
Sbjct 118739 CAGCACCAAGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCATC 118680
Query 35584 GTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643
||||||||||| || ||||| ||||||| ||||||||| | |||| || |||||||||
Sbjct 118679 TTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGGTCGGGGGGAATGCCCTCCTTGTC 118620
Query 35644 CATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGT 35703
| |||||| ||| | | || | | ||||| || | || || |||| ||||| ||
Sbjct 118619 CTGGATCTTAGCCTTGACATTTTCGATGGTGTCACTGGGCTCAACTTCCAGAGTGATGGT 118560
Query 35704 TTTACCCGTCAAAGTTTTCACAAATATCTGCATT 35737
|| || |||| || ||||| || |||||||||
Sbjct 118559 CTTGCCTGTCAGGGTCTTCACGAAGATCTGCATT 118526
Score = 132 bits (146), Expect = 4e-26
Identities = 144/191 (75%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| || |||||||| || | || ||| ||| | || ||||||||||| || |||||
Sbjct 119173 TCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAG 119114
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
|||| || ||||||||| | |||| || |||||||||| |||||| ||| | | ||
Sbjct 119113 ATCAGCCTCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTT 119054
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | ||||| || | || ||||||| ||||| || || || ||||| || || |||
Sbjct 119053 TCGATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTGCCTGTCAAGGTCTTGACA 118994
Query 35726 AATATCTGCAT 35736
|| ||||||||
Sbjct 118993 AAGATCTGCAT 118983
Score = 123 bits (136), Expect = 2e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 35524 CAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTC 35583
|| |||||| || | ||| |||||| || |||||||| || | || ||| ||| | ||
Sbjct 118967 CAGCACCAAGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 118908
Query 35584 GTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643
||||||||||| || ||||| |||| || |||||| || | |||| || || || ||
Sbjct 118907 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCTTTATC 118848
Query 35644 CATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGT 35703
| |||||| || | | || | | ||||| || | || ||||||| ||||| ||
Sbjct 118847 CTGGATCTTGGCTTTGACATTTTCGATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGT 118788
Query 35704 TTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| || ||||| || |||||||| ||||||||
Sbjct 118787 CTTGCCTGTCAAGGTCTTCACAAAGATCTGCAT 118755
>seq1844
Length=2686333
Score = 129 bits (142), Expect = 5e-25
Identities = 143/191 (75%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| || |||||||| |||| | ||| ||| |||| ||||||||||| || |||||
Sbjct 2460717 TCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGCCCGTCTTCCAGCTGCTTGCCAGCAAAG 2460658
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
|||| || ||||||||| | |||| || || |||||| |||||| ||||| | |
Sbjct 2460657 ATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCCTGGATCTTGGCCTTCACATTC 2460598
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | ||||| || | || ||||| | ||||| ||||| || |||| || ||||||
Sbjct 2460597 TCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTTTTCCCAGTCAGGGTCTTCACA 2460538
Query 35726 AATATCTGCAT 35736
|| ||||||||
Sbjct 2460537 AAGATCTGCAT 2460527
Score = 122 bits (134), Expect = 8e-23
Identities = 142/192 (74%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||| || || |||||||| |||| | ||| ||| | || ||||||||||| || |||||
Sbjct 2460490 CTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAA 2460431
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|||| || |||||| || | |||| || ||||||||| |||||| ||||| | |
Sbjct 2460430 GATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATT 2460371
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | ||||| || | || ||||| | ||||| ||||| || |||| || |||||
Sbjct 2460370 CTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTTTTGCCAGTCAGGGTCTTCAC 2460311
Query 35725 AAATATCTGCAT 35736
||| ||||||||
Sbjct 2460310 AAAGATCTGCAT 2460299
Score = 111 bits (122), Expect = 1e-19
Identities = 136/186 (73%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 35555 ATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGC 35614
|||||||| |||| | ||| ||| |||| ||||||||||| || ||||| |||| || |
Sbjct 2460024 ATGTTGTAGTCGGAGAGGGTGCGCCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTC 2459965
Query 35615 TGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTG 35674
|||||||| | |||| || ||||||||| |||||| |||| | | | |||
Sbjct 2459964 TGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCTTTCACGTTCTCAATGGTG 2459905
Query 35675 TCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGC 35734
|| || | || ||||| | || || || || || |||| || |||||||| ||||||
Sbjct 2459904 TCACTGGGCTCAACCTCAAGGGTTATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGC 2459845
Query 35735 ATTCTG 35740
||| ||
Sbjct 2459844 ATTTTG 2459839
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450485167018880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |