Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calypte_20anna_20[refseq_20GCF_5F000699085.1_202014-06-06] 54,736 sequences; 1,105,676,412 total letters Query= NC_027016.1 Length=226084 Score E Sequences producing significant alignments: (Bits) Value seq3929 93.3 6e-14 >seq3929 Length=4502058 Score = 93.3 bits (102), Expect = 6e-14 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 214100 GAGATGTTTGGACTCGTGCCCGGTTTCATGGTGTACGCCATTATCTGGCTGAGAGAGCAC 214159 ||| ||||||| | || || || || ||| |||| || | || |||||||| || ||| Sbjct 979873 GAGGTGTTTGGGTTGGTCCCAGGCTTGATGATGTATGCTACAATATGGCTGAGGGAACAC 979932 Query 214160 AACAGGGTTTGCGACGTGCTGAAACAAGAGCACCCGGAATGGAACGACGAACAGCTGTTC 214219 ||| |||| || ||| | |||||||| ||||| || || ||| | || || ||||||||| Sbjct 979933 AACCGGGTCTGTGACATCCTGAAACAGGAGCATCCAGAGTGGGATGATGAGCAGCTGTTC 979992 Query 214220 CAGATCACTCG 214230 || | ||||| Sbjct 979993 CAAACTACTCG 980003 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 722845890224640