Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calypte_20anna_20[refseq_20GCF_5F000699085.1_202014-06-06] 54,736 sequences; 1,105,676,412 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq3231 208 2e-48 seq324 147 7e-30 seq1844 141 3e-28 seq338 132 1e-25 seq1197 93.3 1e-13 seq1420 89.7 2e-12 >seq3231 Length=6269119 Score = 208 bits (230), Expect = 2e-48 Identities = 932/1465 (64%), Gaps = 25/1465 (2%) Strand=Plus/Plus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 ||||| || ||||| || || || || || || ||||| | ||| | || ||| Sbjct 5107950 GCTATCGGCATCGACTTGGGCACCACGTACTCCTGTGTGGGTGTCTTCCAGCATGGCAAA 5108009 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || || ||||| || || || || ||| |||| ||||| || || || || ||| Sbjct 5108010 GTGGAGATCATTGCCAACGACCAGGGCAACCGAACCACGCCCAGCTATGTGGCCTTCACC 5108069 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || ||||| | || || || |||| || || || | ||| || || | || Sbjct 5108070 GATACGGAGCGCCTCATCGGCGACGCTGCCAAGAACCAGGTGGCTATGAACCCTACCAAC 5108129 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCT 349438 || | || ||||| ||||| || || || | | | | |||| | || ||| Sbjct 5108130 ACCATCTTCGATGCCAAGCGTCTCATCGGCCGCAAGTATGATGACCCCACGGTCCAGTCT 5108189 Query 349439 GATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAG 349498 || | || || | || || ||| || || || ||| || || | | | Sbjct 5108190 GACATGAAGCACTGGCCCTTCCGTGTGGTG---AATGAGAGTGGCAAGCCCAAGGTGCAA 5108246 Query 349499 GTTGAATATAAAGGTGA-ACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTT 349557 || || || || ||||| | || || || || || || || || || ||||| | Sbjct 5108247 GTGGAGTACAAGGGTGAGATGAAGACC-TTCTTCCCAGAGGAGATCAGCTCCATGGTCCT 5108305 Query 349558 AGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTAT 349617 || ||||| || |||||||| || ||| | || | || ||||||| || Sbjct 5108306 TACCAAGATGAAAGAGATTGCTGAGGCTTATCTGGGACGCAAGGTGCAGAATGCTGTCAT 5108365 Query 349618 TACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCAT 349677 || || || || || || ||||| | ||||| || || ||||| ||||||| ||| Sbjct 5108366 CACAGTGCCTGCTTACTTCAATGACTCTCAGCGCCAGGCCACCAAAGACGCTGGCACCAT 5108425 Query 349678 TGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGG 349737 | || | ||||| | | || || || || || || || || || || || ||||| Sbjct 5108426 CACTGGCCTTAATGTGATGCGTATTATCAACGAGCCAACAGCAGCTGCTATAGCCTATGG 5108485 Query 349738 GCTTGATAAAATGAGTGACCA------AGaaaaaaaTATTCTTATTTTTGATTTAGGTGG 349791 | || || | || | ||| || ||| | || || ||||| ||||| || Sbjct 5108486 CTTGGACAAGAAAGGTACTCGGGCTGGAGAGAAGAATGTGCTCATCTTTGACTTAGGAGG 5108545 Query 349792 TGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAAC 349851 |||||||| ||||| || | || || |||| || || || ||||| || || | || Sbjct 5108546 GGGTACTTTCGATGTGTCCATCCTTACCATTGAGGATGGCATCTTTGAGGTGAAGTCCAC 5108605 Query 349852 TGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGT 349911 |||||||| || ||||| ||||| || || ||||| ||||| | || |||||||| Sbjct 5108606 AGCTGGTGACACCCATCTGGGTGGGGAGGACTTTGACAATCGCATGGTGAACCATTTTGT 5108665 Query 349912 TAAAGAATTTAAGCGTCAAGCTAAAAT-TGATATTGGAGATAATCCTAGAGCAATGCGTC 349970 ||||||| |||||| |||| || ||| |||| | || ||||| || | | Sbjct 5108666 GGAAGAATTCAAGCGT-AAGCACAAGCGTGACATTGCTGGCAACAAGCGAGCAGTGAGGC 5108724 Query 349971 GCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTA 350030 | || | || || ||||| | || ||||| || | ||| | || ||| || | Sbjct 5108725 GACTGCGTACAGCTTGTGAGAGGGCCAAGCGCACCCTCAGCTCTTCCACACAAGCCAGCA 5108784 Query 350031 TTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGT 350090 |||| || || || || || |||| || |||| | || ||||| ||||| || | Sbjct 5108785 TTGAGATCGACTCCCTCTACGAGGGCATTGACTTCTACACCTCCATTACTCGTGCCCGCT 5108844 Query 350091 TTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAA 350150 |||| || | | ||||| || | | || |||| || ||||| || | | Sbjct 5108845 TTGAGGAGCTCAATGCCGATCTCTTCCGTGGCACCTTGGAGCCAGTGGAGAAGGCTCTGC 5108904 Query 350151 AAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACAC 350210 ||||| || | || ||||| | || | || | || || || ||||| | Sbjct 5108905 GTGATGCCAAGCTCGATAAGGGCCAGATCCAGGAGATTGTGCTGGTGGGGGGCTCTACCC 5108964 Query 350211 GTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAAC-CTTCTAGA 350269 |||| || || | ||| || | ||| || || || ||||||||||| | | | ||| Sbjct 5108965 GTATCCCTAAGATCCAAAAGCTGCTACAGGACTTCTTCAATGGCAAAGAGCTCAACAAGA 5109024 Query 350270 TCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCT 350329 || | || || ||||| |||||||| || ||||||||||| || ||| |||| | Sbjct 5109025 GCA-TCAACCCTGATGAGGCTGTTGCTTACGGTGCTGCTGTGCAAGCAGCTATACTCATG 5109083 Query 350330 GGAAATAAGAGTTCTAAAATTG---ATGATCTATTACTACTAGATGTAACTCCACTTTCG 350386 ||| | ||| ||| | | || | |||||| | || || ||||| || || || || Sbjct 5109084 GGAGACAAG---TCTGAGAATGTGCAGGATCTACTGCTGCTGGATGTCACCCCTCTGTCC 5109140 Query 350387 CTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTA 350446 || || | || || | |||| ||| ||||||| ||| || | || | || | Sbjct 5109141 CTGGGCATCGAGACAGCCGGTGGAGTGATGACTGCTCTCATCAAGCGCAACACCACCATT 5109200 Query 350447 CCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAAC--AA 350504 || || ||| | | || || || | || | |||| || ||| ||| || | | Sbjct 5109201 CCCACCAAACAAACTCAGACCTTCACCACCTACTCAGACAACCAG--AGCAGTGTCCTAG 5109258 Query 350505 TTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTA 350564 | || || | || ||||| | ||| || || ||||| || ||| || | ||| Sbjct 5109259 TCCAGGTGTACGAGGGTGAGAGGGCTATGACAAAGGATAACAACTTACTGGGCAAGTTTG 5109318 Query 350565 CCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATA 350624 |||| | || || ||| || | ||||| || ||||| || ||| |||| || | Sbjct 5109319 ATCTAACGGGCATCCCCCCAGCACCCCGTGGAGTCCCCCAGATCGAGGTCACTTTTGACA 5109378 Query 350625 TTGATTCAAATGGTATTTTAAATGT 350649 ||||| | |||||||| | ||||| Sbjct 5109379 TTGATGCCAATGGTATCCTGAATGT 5109403 >seq324 Length=3932543 Score = 147 bits (162), Expect = 7e-30 Identities = 158/208 (76%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 |||| || ||||||||||| || || || || || ||||| | || ||||||||||| | Sbjct 118961 CAAG-TGCAGAGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCA 118903 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649 | || || ||||||||||| || | |||||||| || ||||| |||||||||||||| | Sbjct 118902 GCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCTTTATCCTGGA 118843 Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709 | || ||||| ||||| || || | ||| || ||||| || || || | ||||| | Sbjct 118842 TCTTGGCTTTGACATTTTCGATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTGC 118783 Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || | || || ||||| |||||||| Sbjct 118782 CTGTCAAGGTCTTCACAAAGATCTGCAT 118755 Score = 125 bits (138), Expect = 2e-23 Identities = 154/209 (74%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 |||| || ||||||||||| || || || || || ||||| | || || |||||||| | Sbjct 118733 CAAG-TGCAGAGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCATCTTCCA 118675 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649 | || || ||||||||||| | | ||||| || || ||||| || || || ||||| | Sbjct 118674 GCTGCTTGCCAGCAAAGATCAACCTCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGA 118615 Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709 | ||||| || ||||| || || | ||| || |||||||| || || | ||||| | Sbjct 118614 TCTTAGCCTTGACATTTTCGATGGTGTCACTGGGCTCAACTTCCAGAGTGATGGTCTTGC 118555 Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCATT 140738 | || || || || || || ||||||||| Sbjct 118554 CTGTCAGGGTCTTCACGAAGATCTGCATT 118526 Score = 122 bits (134), Expect = 3e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || |||||||| || || || || || || || || || ||||| | || ||||||||| Sbjct 119194 AGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 119135 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || ||||||||||| || | ||||| || || ||||| || || || ||| Sbjct 119134 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCCTCCTTGTCC 119075 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || || || || ||||| || || | ||| || ||||| || || || | ||| Sbjct 119074 TGGATCTTGGCCTTGACATTTTCGATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTC 119015 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || | || || ||||| |||||||| Sbjct 119014 TTGCCTGTCAAGGTCTTGACAAAGATCTGCAT 118983 >seq1844 Length=2686333 Score = 141 bits (156), Expect = 3e-28 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || |||||||| || || |||||||| | || || || || || | || ||||| ||| Sbjct 2460054 AGCACAAGATGGAGGGTTGACTCTTTCGGGATGTTGTAGTCGGAGAGGGTGCGCCCGTCT 2459995 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || ||||||||||| || | ||||| ||||| ||||| ||||| || ||| Sbjct 2459994 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTGTCC 2459935 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || || ||||| || || ||||| | ||| || ||||| ||||| || | ||| Sbjct 2459934 TGGATCTTGGCTTTCACGTTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTTATGGTC 2459875 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 || || || || || || ||||| ||||||||| Sbjct 2459874 TTGCCAGTCAGGGTCTTCACAAAGATCTGCATT 2459842 Score = 140 bits (154), Expect = 1e-27 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || || ||||| || || |||||||| || || || || || || | || ||||||||| Sbjct 2460510 AGCACGAGATGCAGGGTTGACTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGCCCATCT 2460451 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || ||||||||||| || | ||||||||||| ||||| ||||| || ||| Sbjct 2460450 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCC 2460391 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || || || || ||||| ||||| | ||| || ||||| || || || | || Sbjct 2460390 TGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTT 2460331 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || || || ||||| |||||||| Sbjct 2460330 TTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 2460299 Score = 134 bits (148), Expect = 4e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || |||||||| || || || || || || || || || ||||| | || ||||||||| Sbjct 2460282 AGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 2460223 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || | || || ||||||||||| || | ||||| ||||| ||||| |||||||||||| Sbjct 2460222 TCCAACTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCTTTATCC 2460163 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || || ||||| || || ||||| | || || ||||| || || || | || Sbjct 2460162 TGGATCTTGGCTTTCACGTTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTT 2460103 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || || || ||||| |||||||| Sbjct 2460102 TTCCCAGTCAGGGTCTTCACAAAGATCTGCAT 2460071 Score = 131 bits (144), Expect = 5e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || |||||||| || || || || || || || || || || || | || ||||| ||| Sbjct 2460738 AGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGCCCGTCT 2460679 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || ||||||||||| || | ||||| ||||| ||||| |||||||| ||| Sbjct 2460678 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCC 2460619 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || || || || ||||| ||||| | ||| || ||||| || || || | || Sbjct 2460618 TGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTT 2460559 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || || || ||||| |||||||| Sbjct 2460558 TTCCCAGTCAGGGTCTTCACAAAGATCTGCAT 2460527 >seq338 Length=1383603 Score = 132 bits (146), Expect = 1e-25 Identities = 357/539 (66%), Gaps = 8/539 (1%) Strand=Plus/Plus Query 349770 TTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGG 349829 |||| || || || | || ||||| || |||||||| || | || ||| ||||||| | Sbjct 66024 TTCTGATCTTCGACCTGGGAGGTGGCACCTTTGATGTGTCCATCCTGACAATTGAAGATG 66083 Query 349830 GAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATA 349889 | || ||||| || ||| | ||||| ||||| || || | ||||||||||| || || | Sbjct 66084 GCATCTTTGAGGTGAAATCCACTGCGGGTGACACTCACTTGGGTGGAGAAGACTTCGACA 66143 Query 349890 ATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGCTAAA-ATTGATATTGGA 349948 | | | || || || || || || ||| | |||| || | || || | Sbjct 66144 ACAGGATGGTGAACCACTTCATTGCTGAGTTCAAGAGG-AAGCACAAGAAGGACATCAGT 66202 Query 349949 GATAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTA 350008 || || ||||| | || ||||| | || || || || || || ||| | || | Sbjct 66203 GAGAACAAGAGAGCTGTTCGGCGCCTCCGCACCGCCTGCGAGCGGGCCAAGAGGACCCTG 66262 Query 350009 TCATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTT 350068 || || | ||||| || ||||||||||||||||| ||| || | || |||| Sbjct 66263 TCCTCCAGCACCCAGGCCAGCATTGAAATTGATTCTCTCTATGAGGGTATTGACTTCTAC 66322 Query 350069 TCATCTATTACACGTGCTCGGTTTGAAGAATTATGTATG--GATCTTTTTAGAGCAACAA 350126 |||| || || | ||||| |||||||| || ||| || || || | | || Sbjct 66323 ACATCCATCACCAGAGCTCGCTTTGAAGA--GCTGAATGCTGACCTCTTCCGTGGCACTC 66380 Query 350127 TGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAG 350186 ||||||||||||| || | | ||||| || || ||| ||||| |||| Sbjct 66381 TGGATCCTGTGGAGAAGGCTCTGCGGGATGCCAAGCTGGACAAGTCCCAGATCCATGACA 66440 Query 350187 TAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTT 350246 | || | ||||| || ||||| ||||| || || |||| |||| || || || | Sbjct 66441 TCGTGCTGGTTGGGGGGTCTACTCGTATCCCCAAGATTCAGAAGTTGCTGCAGGATTTCT 66500 Query 350247 TTAATGGCAAAGAAC-CTTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGC 350304 | ||||||||||| | | ||| | || ||||| ||||| ||||| || || ||||| Sbjct 66501 TCAATGGCAAAGAGCTGAACAAGAGC-ATCAATCCTGATGAGGCTGTGGCTTACGGTGC 66558 Score = 111 bits (122), Expect = 5e-19 Identities = 114/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 349598 ACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCA 349657 || || ||| ||||||| | ||||| ||||||||||| ||||| |||||||| || Sbjct 65764 ACTGTTACTAATGCTGTAGTGACTGTGCCAGCCTATTTCAATGACTCCCAGCGTCAGGCT 65823 Query 349658 ACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACT 349717 || |||||||| || | |||||| ||| | || || || ||||| || ||||| || || Sbjct 65824 ACTAAAGATGCAGGAACCATTGCAGGGCTCAACGTGCTGAGAATCATCAATGAGCCAACA 65883 Query 349718 GCTGCAGCAATTGCATATGGGCTTGATAA 349746 ||||| || ||||| ||||| || || || Sbjct 65884 GCTGCTGCCATTGCTTATGGTCTGGACAA 65912 Score = 91.5 bits (100), Expect = 4e-13 Identities = 341/526 (65%), Gaps = 8/526 (2%) Strand=Plus/Minus Query 183262 CTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGATAAT-TCTTTGCCATTA 183320 ||||||| || || ||||| ||||| || || || | | | | | ||||||||||| Sbjct 66560 CTGCACCGTAAGCCACAGCCTCATCAGGATTGAT-GCTCTTGTTCAGCTCTTTGCCATTG 66502 Query 183321 AA-AAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCACCGACTAATAC 183379 || |||| ||| | ||| | ||||| || || || | ||| || || || || | || Sbjct 66501 AAGAAATCCTGCA-GCAACTTCTGAATCTTGGGGATACGAGTAGACCCCCCAACCAGCAC 66443 Query 183380 TACTTCATCGATATT--ACTTTTACTAATTTGTGAATCTTTTAAAACTTTTTCAACAGGG 183437 | |||| ||| | |||| | | | ||| | ||| | | | || || ||||| Sbjct 66442 GATGTCATGGATCTGGGACTTGTCC-AGCTTG-GCATCCCGCAGAGCCTTCTCCACAGGA 66385 Query 183438 TCCATAGTTTTTCTAAATAAATCTATACATAACTCTTCTAATCTTGCTCTAGTTAAAGAT 183497 |||| ||| | || | || | | |||||| || | ||||| || | ||| Sbjct 66384 TCCAGAGTGCCACGGAAGAGGTCAGCATTCAGCTCTTCAAAGCGAGCTCTGGTGATGGAT 66325 Query 183498 GaaaaaaaGTCAATACCATTATATAAGGAATCAATTTCAATCGATGTTTGTGTAGATGAT 183557 | | ||||||||||| | ||| | |||||||||||||| | || || || Sbjct 66324 GTGTAGAAGTCAATACCCTCATAGAGAGAATCAATTTCAATGCTGGCCTGGGTGCTGGAG 66265 Query 183558 GATAATGTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTCGACGTAATGATCTTGGATTA 183617 || | || || || || || || || || || | || || || | | ||| || Sbjct 66264 GACAGGGTCCTCTTGGCCCGCTCGCAGGCGGTGCGGAGGCGCCGAACAGCTCTCTTGTTC 66205 Query 183618 TCTGTAATATCTTGTTTATGTTTTCTTTTAAATTCAGTAATAAAATGTTGAAGTAATCTT 183677 || | || || | || || || || || || |||| ||| || || | | | || Sbjct 66204 TCACTGATGTCCTTCTTGTGCTTCCTCTTGAACTCAGCAATGAAGTGGTTCACCATCCTG 66145 Query 183678 GTATCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATT 183737 | || || ||||| ||||| || || || || || ||||| | ||| || ||||| || Sbjct 66144 TTGTCGAAGTCTTCTCCACCCAAGTGAGTGTCACCCGCAGTGGATTTCACCTCAAAGATG 66085 Query 183738 CCGTCTTCAATATTTAAAATTGATACATCAAATGTACCACCACCCA 183783 || |||||||| | | || || |||||||| || ||||| |||| Sbjct 66084 CCATCTTCAATTGTCAGGATGGACACATCAAAGGTGCCACCTCCCA 66039 >seq1197 Length=5421966 Score = 93.3 bits (102), Expect = 1e-13 Identities = 138/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 183250 CAGCTTGAACAGCTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGATAATT 183309 |||| || |||||||||||||| || ||||| |||||||||||||| |||||| | Sbjct 3551991 CAGCCTGGACAGCTGCACCATAGGCTACAGCCTCATCTGGGTTAATGCCACGAGAAGGCT 3551932 Query 183310 CTTTGCCATTAAAAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCAC 183369 | || ||||| || || || || || || || ||||| || || | ||| || |||| Sbjct 3551931 CCTTCCCATTGAAGAACTCCTTAACCAGCTGCTGTATTTTGGGGATGCGAGTAGAGCCAC 3551872 Query 183370 CGACTAATACTACTTCATCGATATTACTTTTACTAATTTGTGAATCTTTTAAAACTTTTT 183429 | || | || | ||||| || | | || | | | ||||||| | |||||| | Sbjct 3551871 CAACAAGAACAATCTCATCAATGTCAGACTTCTTCAGGTCAGAATCTTCCAGAACTTTCT 3551812 Query 183430 CAACAGGGTCCATAGT 183445 |||||| | |||||| Sbjct 3551811 GAACAGGCTTCATAGT 3551796 Score = 86.0 bits (94), Expect = 2e-11 Identities = 123/173 (71%), Gaps = 3/173 (2%) Strand=Plus/Plus Query 349715 ACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTT 349774 || ||||| || ||||| ||||| | || || ||| || || || || || || Sbjct 3551079 ACAGCTGCTGCCATTGCTTATGGATTGGACAA---GAGAGAGGGTGAGAAGAACATCCTC 3551135 Query 349775 ATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATT 349834 | ||||| || |||||||| ||||||||||| || || || ||| |||| | ||| | Sbjct 3551136 GTGTTTGACTTGGGTGGTGGAACTTTTGATGTCTCCCTCCTCACAATTGACAATGGAGTC 3551195 Query 349835 TTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGA 349887 |||||||| || || |||||| || || | ||||||||||| ||||| Sbjct 3551196 TTTGAAGTGGTGGCTACAAATGGTGACACTCACTTGGGTGGAGAAGACTTTGA 3551248 >seq1420 Length=3350139 Score = 89.7 bits (98), Expect = 2e-12 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 140548 CTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGA 140607 |||||||||| || || ||||| | ||| || |||||||| || || || |||||||| | Sbjct 2047922 CTTTTTGAATGTTGTAGTCAGACAGTGTGCGTCCATCTTCTAGCTGCTTCCCAGCAAAAA 2047981 Query 140608 TTAGACGTTGCTGATCAGGAGGAATTCCT 140636 | || || ||||||||||||||||| ||| Sbjct 2047982 TCAGCCGCTGCTGATCAGGAGGAATGCCT 2048010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1514191744513008